RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CATSPER4Q7RTX7 472 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 CDR2LQ86X02 465 aaPredicted RBP5.7□□□□□ -1.5
SF3B3-214ENST00000572365 RHPN2Q8IUC4 686 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 THAP4Q8WY91 577 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 ELSPBP1Q96BH3 223 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 CTHRC1Q96CG8 243 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 CDHR1Q96JP9 859 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 UBXN10Q96LJ8 280 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 ZSCAN31Q96LW9 406 aaPredicted RBP5.7□□□□□ -1.5
SF3B3-214ENST00000572365 LRRC3BQ96PB8 259 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 UBAC1Q9BSL1 405 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 GTPBP2Q9BX10 602 aaKnown RBP5.7□□□□□ -1.5
SF3B3-214ENST00000572365 TSPYL1Q9H0U9 437 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 CXCL16Q9H2A7 254 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 PSTPIP2Q9H939 334 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 ZFP14Q9HCL3 533 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 NAP1L2Q9ULW6 460 aaPredicted RBP5.7□□□□□ -1.5
SF3B3-214ENST00000572365 NFU1Q9UMS0 254 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 COL6A6A6NMZ7 2263 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 MYO16Q9Y6X6 1858 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 DOPEY1Q5JWR5 2465 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 NBPF19A0A087WUL8 3843 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 ABCA12Q86UK0 2595 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 BOD1L1Q8NFC6 3051 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 SPTAN1Q13813 2472 aaKnown RBP5.69□□□□□ -1.5
SF3B3-214ENST00000572365 CABIN1Q9Y6J0 2220 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 IGKV6D-21A0A0A0MT36 114 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 GXYLT2A0PJZ3 443 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 FAM149AA5PLN7 773 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 ARL5CA6NH57 179 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 HMX3A6NHT5 357 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 HEPACAM2A8MVW5 462 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 I3L4J1 428 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 TJP3O95049 919 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 PLEKHA8P1O95397 391 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 PRKCBP05771 671 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 TMEM225BP0DP42 221 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 BCKDHBP21953 392 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 PCSK6P29122 969 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 GKP32189 559 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 PBX1P40424 430 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 MLH1P40692 756 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 MAPK9P45984 424 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 CYP1B1Q16678 543 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 UGCGQ16739 394 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 TMEM196Q5HYL7 178 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 TTC22Q5TAA0 569 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 FAM90A2PQ658T7 463 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 MSANTD2Q6P1R3 559 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 LVRNQ6Q4G3 990 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 PIK3AP1Q6ZUJ8 805 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 USP51Q70EK9 711 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 LINC01465Q8N7H1 131 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 CSGALNACT1Q8TDX6 532 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 HDAC7Q8WUI4 952 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 OVCA2Q8WZ82 227 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 SDCCAG3Q96C92 435 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 CPB2Q96IY4 423 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 TBATAQ96M53 351 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 NLRP4Q96MN2 994 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 TMEM175Q9BSA9 504 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 TTPALQ9BTX7 342 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 KRTAP4-11Q9BYQ6 195 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 GCOM2Q9BZD3 368 aaPredicted RBP5.69□□□□□ -1.5
SF3B3-214ENST00000572365 MINDY3Q9H8M7 445 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 FBRSL1Q9HCM7 1045 aaKnown RBP5.69□□□□□ -1.5
SF3B3-214ENST00000572365 SYBUQ9NX95 663 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 FBXW11Q9UKB1 542 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 PRDM4Q9UKN5 801 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 SLC8A2Q9UPR5 921 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 MYLKQ15746 1914 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 CREBBPQ92793 2442 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 RELNP78509 3460 aa5.69□□□□□ -1.5
SF3B3-214ENST00000572365 ATXN2Q99700 1313 aaKnown RBP5.69□□□□□ -1.5
SF3B3-214ENST00000572365 CASTOR2A6NHX0 329 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 SPECC1L-ADORA2AF8WAN1 911 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 EIF3FO00303 357 aaPredicted RBP5.68□□□□□ -1.5
SF3B3-214ENST00000572365 IFIT3O14879 490 aaKnown RBP5.68□□□□□ -1.5
SF3B3-214ENST00000572365 SPRY2O43597 315 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 PMPCBO75439 489 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 CHRM2P08172 466 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 ZFXP17010 805 aaPredicted RBP5.68□□□□□ -1.5
SF3B3-214ENST00000572365 PSMC3P17980 439 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 TMOD1P28289 359 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 AKT1P31749 480 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 EIF2S3P41091 472 aaKnown RBP5.68□□□□□ -1.5
SF3B3-214ENST00000572365 SRSF1Q07955 248 aaKnown RBP eCLIP5.68□□□□□ -1.5
SF3B3-214ENST00000572365 KCNJ12Q14500 433 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 PTPAQ15257 358 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 PSMD5Q16401 504 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 BTBD16Q32M84 506 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 LSM12Q3MHD2 195 aaKnown RBP5.68□□□□□ -1.5
SF3B3-214ENST00000572365 ADCK5Q3MIX3 580 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 C20orf194Q5TEA3 1177 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 MIS18BP1Q6P0N0 1132 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 Q6ZNX1 250 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 TRABD2AQ86V40 505 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 PLA2G4DQ86XP0 818 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 RNF168Q8IYW5 571 aaPredicted RBP5.68□□□□□ -1.5
SF3B3-214ENST00000572365 OR6Y1Q8NGX8 325 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms