RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 RPIAP49247 311 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 PDX1P52945 283 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 IFI35P80217 286 aaPredicted RBP14.63□□□□□ -0.07
FANCA-220ENST00000566409 CDK3Q00526 305 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 DPTQ07507 201 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 ARHGEF7Q14155 803 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 OGFOD3Q6PK18 319 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 MFSD7Q6UXD7 560 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 USP45Q70EL2 814 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 B4GALNT4Q76KP1 1039 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 HEATR4Q86WZ0 1026 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 VSIG1Q86XK7 387 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 GKN2Q86XP6 184 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 GPR156Q8NFN8 814 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 SCG3Q8WXD2 468 aaKnown RBP14.63□□□□□ -0.07
FANCA-220ENST00000566409 GLMNQ92990 594 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 NAT6Q93015 286 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 SCAMP4Q969E2 229 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 RNF25Q96BH1 459 aaPredicted RBP14.63□□□□□ -0.07
FANCA-220ENST00000566409 OLFM3Q96PB7 478 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 FRMD8Q9BZ67 464 aaPredicted RBP14.63□□□□□ -0.07
FANCA-220ENST00000566409 ABCG8Q9H221 673 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 GOLPH3Q9H4A6 298 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 KCTD5Q9NXV2 234 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 CD84Q9UIB8 345 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 DOLKQ9UPQ8 538 aa14.63□□□□□ -0.07
FANCA-220ENST00000566409 PMS2P1A4D2B8 440 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 NTN3O00634 580 aaPredicted RBP14.62□□□□□ -0.07
FANCA-220ENST00000566409 NOBOXO60393 691 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 LCA5LO95447 670 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 CLDN7O95471 211 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 KRT1P04264 644 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 TNNT1P13805 278 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 KELP23276 732 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 NFKBIAP25963 317 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 ITPKBP27987 946 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 TEAD1P28347 426 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 EIF2S3P41091 472 aaKnown RBP14.62□□□□□ -0.07
FANCA-220ENST00000566409 MAGEA1P43355 309 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 STC1P52823 247 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 SKOR1P84550 965 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 TAZQ16635 292 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 TAF8Q7Z7C8 310 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 NRROSQ86YC3 692 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 RHOT1Q8IXI2 618 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 FGF11Q92914 225 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 CCDC74AQ96AQ1 378 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 ATXN7L3BQ96GX2 97 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 DCBLD2Q96PD2 775 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 AGAP2Q99490 1192 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 CEP41Q9BYV8 373 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 RBSNQ9H1K0 784 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 PCDH9Q9HC56 1237 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 ENTPD2Q9Y5L3 495 aa14.62□□□□□ -0.07
FANCA-220ENST00000566409 CAPN8A6NHC0 703 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 APOL1O14791 398 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 CD86P42081 329 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 CDKN2BP42772 138 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 SLC1A1P43005 524 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 LSSP48449 732 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 HADHBP55084 474 aaKnown RBP14.61□□□□□ -0.07
FANCA-220ENST00000566409 ADCY2Q08462 1091 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 LLGL1Q15334 1064 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 QPCTQ16769 361 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 TBC1D25Q3MII6 688 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 RAET1GQ6H3X3 334 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 RBM44Q6ZP01 1051 aaKnown RBP14.61□□□□□ -0.07
FANCA-220ENST00000566409 FAM46DQ8NEK8 389 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 SNIP1Q8TAD8 396 aaKnown RBP14.61□□□□□ -0.07
FANCA-220ENST00000566409 GPBAR1Q8TDU6 330 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 PRR11Q96HE9 360 aaPredicted RBP14.61□□□□□ -0.07
FANCA-220ENST00000566409 WDR24Q96S15 920 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 LYSMD1Q96S90 227 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 POLR1BQ9H9Y6 1135 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 CARS2Q9HA77 564 aaKnown RBP14.61□□□□□ -0.07
FANCA-220ENST00000566409 PHPT1Q9NRX4 125 aaPredicted RBP14.61□□□□□ -0.07
FANCA-220ENST00000566409 SPATS2LQ9NUQ6 558 aaKnown RBP14.61□□□□□ -0.07
FANCA-220ENST00000566409 SAE1Q9UBE0 346 aaPredicted RBP14.61□□□□□ -0.07
FANCA-220ENST00000566409 MOSPD1Q9UJG1 213 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 SUFUQ9UMX1 484 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 SLC17A4Q9Y2C5 497 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 ALG6Q9Y672 507 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 AHCTF1Q8WYP5 2266 aa14.61□□□□□ -0.07
FANCA-220ENST00000566409 SCN8AQ9UQD0 1980 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 A0A1W2PQM1 296 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 GOLGA6CA6NDK9 693 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 GOLGA6BA6NDN3 693 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 ANKRD66B4E2M5 251 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 PDE2AO00408 941 aaPredicted RBP14.6□□□□□ -0.07
FANCA-220ENST00000566409 TCEA3O75764 348 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 DXOO77932 396 aaKnown RBP14.6□□□□□ -0.07
FANCA-220ENST00000566409 GOLGA6DP0CG33 693 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 KRT10P13645 584 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 HOXB3P14651 431 aaPredicted RBP14.6□□□□□ -0.07
FANCA-220ENST00000566409 ZNF30P17039 623 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 NOP2P46087 812 aaKnown RBP14.6□□□□□ -0.07
FANCA-220ENST00000566409 MARCKSL1P49006 195 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 ZNF75DP51815 510 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 EPHB1P54762 984 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 RPL26P61254 145 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms