RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 LONRF2Q1L5Z9 754 aa23.28■■□□□ 1.32
SUMO3-205ENST00000466861 SAP25Q8TEE9 199 aa23.28■■□□□ 1.32
SUMO3-205ENST00000466861 BTN2A2Q8WVV5 523 aa23.28■■□□□ 1.32
SUMO3-205ENST00000466861 PKD2L2Q9NZM6 624 aa23.28■■□□□ 1.32
SUMO3-205ENST00000466861 NFKBIL1Q9UBC1 381 aaPredicted RBP23.28■■□□□ 1.32
SUMO3-205ENST00000466861 ARID1BQ8NFD5 2236 aaPredicted RBP23.27■■□□□ 1.32
SUMO3-205ENST00000466861 H3BM21 787 aa23.27■■□□□ 1.32
SUMO3-205ENST00000466861 CACNB4O00305 520 aaPredicted RBP23.27■■□□□ 1.32
SUMO3-205ENST00000466861 CLDN7O95471 211 aa23.27■■□□□ 1.32
SUMO3-205ENST00000466861 PCCBP05166 539 aa23.27■■□□□ 1.32
SUMO3-205ENST00000466861 C1SP09871 688 aa23.27■■□□□ 1.32
SUMO3-205ENST00000466861 NME1P15531 152 aaKnown RBP23.27■■□□□ 1.32
SUMO3-205ENST00000466861 CXCR5P32302 372 aa23.27■■□□□ 1.32
SUMO3-205ENST00000466861 ACTN2P35609 894 aa23.27■■□□□ 1.32
SUMO3-205ENST00000466861 SPINT3P49223 89 aa23.27■■□□□ 1.32
SUMO3-205ENST00000466861 FAM182AQ5T1J6 154 aa23.27■■□□□ 1.32
SUMO3-205ENST00000466861 C4orf22Q6V702 233 aa23.27■■□□□ 1.32
SUMO3-205ENST00000466861 RANBP10Q6VN20 620 aa23.27■■□□□ 1.32
SUMO3-205ENST00000466861 TMC3Q7Z5M5 1100 aa23.27■■□□□ 1.32
SUMO3-205ENST00000466861 NAXDQ8IW45 347 aa23.27■■□□□ 1.32
SUMO3-205ENST00000466861 IPMKQ8NFU5 416 aa23.27■■□□□ 1.32
SUMO3-205ENST00000466861 C1orf54Q8WWF1 131 aa23.27■■□□□ 1.32
SUMO3-205ENST00000466861 GORASP1Q9BQQ3 440 aa23.27■■□□□ 1.32
SUMO3-205ENST00000466861 USP27XA6NNY8 438 aa23.26■■□□□ 1.31
SUMO3-205ENST00000466861 ATP1A1P05023 1023 aaKnown RBP23.26■■□□□ 1.31
SUMO3-205ENST00000466861 TCP1P17987 556 aaKnown RBP23.26■■□□□ 1.31
SUMO3-205ENST00000466861 ADRA1AP35348 466 aa23.26■■□□□ 1.31
SUMO3-205ENST00000466861 BLKP51451 505 aa23.26■■□□□ 1.31
SUMO3-205ENST00000466861 DCDC1P59894 354 aa23.26■■□□□ 1.31
SUMO3-205ENST00000466861 PTPRRQ15256 657 aa23.26■■□□□ 1.31
SUMO3-205ENST00000466861 SIRPB2Q5JXA9 342 aa23.26■■□□□ 1.31
SUMO3-205ENST00000466861 DENND2CQ68D51 928 aa23.26■■□□□ 1.31
SUMO3-205ENST00000466861 KDELC2Q7Z4H8 507 aa23.26■■□□□ 1.31
SUMO3-205ENST00000466861 AP2M1Q96CW1 435 aa23.26■■□□□ 1.31
SUMO3-205ENST00000466861 SMIM14Q96QK8 99 aa23.26■■□□□ 1.31
SUMO3-205ENST00000466861 OSBPL9Q96SU4 736 aa23.26■■□□□ 1.31
SUMO3-205ENST00000466861 TEX101Q9BY14 249 aa23.26■■□□□ 1.31
SUMO3-205ENST00000466861 ABCG8Q9H221 673 aa23.26■■□□□ 1.31
SUMO3-205ENST00000466861 WDR26Q9H7D7 661 aa23.26■■□□□ 1.31
SUMO3-205ENST00000466861 ARNT2Q9HBZ2 717 aa23.26■■□□□ 1.31
SUMO3-205ENST00000466861 SNX12Q9UMY4 172 aa23.26■■□□□ 1.31
SUMO3-205ENST00000466861 ZNF711Q9Y462 761 aa23.26■■□□□ 1.31
SUMO3-205ENST00000466861 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.26■■□□□ 1.311e-8■□□□□ 8
SUMO3-205ENST00000466861 COL5A1P20908 1838 aaPredicted RBP23.25■■□□□ 1.31
SUMO3-205ENST00000466861 ERI2A8K979 691 aaKnown RBP23.25■■□□□ 1.31
SUMO3-205ENST00000466861 TNFRSF10CO14798 259 aa23.25■■□□□ 1.31
SUMO3-205ENST00000466861 PIAS2O75928 621 aa23.25■■□□□ 1.31
SUMO3-205ENST00000466861 FDFT1P37268 417 aa23.25■■□□□ 1.31
SUMO3-205ENST00000466861 GDF10P55107 478 aa23.25■■□□□ 1.31
SUMO3-205ENST00000466861 ZDHHC20Q5W0Z9 365 aa23.25■■□□□ 1.31
SUMO3-205ENST00000466861 KCTD11Q693B1 232 aa23.25■■□□□ 1.31
SUMO3-205ENST00000466861 KANSL1Q7Z3B3 1105 aa23.25■■□□□ 1.31
SUMO3-205ENST00000466861 LYSMD3Q7Z3D4 306 aa23.25■■□□□ 1.31
SUMO3-205ENST00000466861 PLA2G15Q8NCC3 412 aa23.25■■□□□ 1.31
SUMO3-205ENST00000466861 ACTRT1Q8TDG2 376 aa23.25■■□□□ 1.31
SUMO3-205ENST00000466861 CDC6Q99741 560 aa23.25■■□□□ 1.31
SUMO3-205ENST00000466861 C19orf43Q9BQ61 176 aa23.25■■□□□ 1.31
SUMO3-205ENST00000466861 GPR63Q9BZJ6 419 aa23.25■■□□□ 1.31
SUMO3-205ENST00000466861 PHPT1Q9NRX4 125 aaPredicted RBP23.25■■□□□ 1.31
SUMO3-205ENST00000466861 CSNK1G3Q9Y6M4 447 aa23.25■■□□□ 1.31
SUMO3-205ENST00000466861 DCDC2BA2VCK2 349 aa23.24■■□□□ 1.31
SUMO3-205ENST00000466861 PGRMC1O00264 195 aaKnown RBP23.24■■□□□ 1.31
SUMO3-205ENST00000466861 SH3BP5O60239 455 aa23.24■■□□□ 1.31
SUMO3-205ENST00000466861 MYCLP1P12525 358 aaPredicted RBP23.24■■□□□ 1.31
SUMO3-205ENST00000466861 HMGCLP35914 325 aa23.24■■□□□ 1.31
SUMO3-205ENST00000466861 EIF2B5Q13144 721 aaKnown RBP23.24■■□□□ 1.31
SUMO3-205ENST00000466861 PRAMEF14Q5SWL7 426 aa23.24■■□□□ 1.31
SUMO3-205ENST00000466861 HENMT1Q5T8I9 393 aaKnown RBP23.24■■□□□ 1.31
SUMO3-205ENST00000466861 ADAMTSL4Q6UY14 1074 aa23.24■■□□□ 1.31
SUMO3-205ENST00000466861 ERMP1Q7Z2K6 904 aa23.24■■□□□ 1.31
SUMO3-205ENST00000466861 DGLUCYQ7Z3D6 616 aa23.24■■□□□ 1.31
SUMO3-205ENST00000466861 GLRX5Q86SX6 157 aa23.24■■□□□ 1.31
SUMO3-205ENST00000466861 SDR16C5Q8N3Y7 309 aa23.24■■□□□ 1.31
SUMO3-205ENST00000466861 DTX3LQ8TDB6 740 aa23.24■■□□□ 1.31
SUMO3-205ENST00000466861 FUBP1Q96AE4 644 aaKnown RBP23.24■■□□□ 1.31
SUMO3-205ENST00000466861 WDR92Q96MX6 357 aa23.24■■□□□ 1.31
SUMO3-205ENST00000466861 FAM83DQ9H4H8 585 aa23.24■■□□□ 1.31
SUMO3-205ENST00000466861 LRRC40Q9H9A6 602 aa23.24■■□□□ 1.31
SUMO3-205ENST00000466861 DNAJC28Q9NX36 388 aa23.24■■□□□ 1.31
SUMO3-205ENST00000466861 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.24■■□□□ 1.31
SUMO3-205ENST00000466861 PAK5Q9P286 719 aa23.24■■□□□ 1.31
SUMO3-205ENST00000466861 PCOLCE2Q9UKZ9 415 aa23.24■■□□□ 1.31
SUMO3-205ENST00000466861 NEMP2A6NFY4 417 aa23.23■■□□□ 1.31
SUMO3-205ENST00000466861 CBFA2T3O75081 653 aa23.23■■□□□ 1.31
SUMO3-205ENST00000466861 PPFIA2O75334 1257 aa23.23■■□□□ 1.31
SUMO3-205ENST00000466861 KCNK5O95279 499 aa23.23■■□□□ 1.31
SUMO3-205ENST00000466861 METTL18O95568 372 aa23.23■■□□□ 1.31
SUMO3-205ENST00000466861 GPR1P46091 355 aa23.23■■□□□ 1.31
SUMO3-205ENST00000466861 GNG11P61952 73 aa23.23■■□□□ 1.31
SUMO3-205ENST00000466861 PPARDQ03181 441 aa23.23■■□□□ 1.31
SUMO3-205ENST00000466861 TPRG1LQ5T0D9 272 aa23.23■■□□□ 1.31
SUMO3-205ENST00000466861 PDPK2PQ6A1A2 396 aa23.23■■□□□ 1.31
SUMO3-205ENST00000466861 RAET1GQ6H3X3 334 aa23.23■■□□□ 1.31
SUMO3-205ENST00000466861 CCDC89Q8N998 374 aa23.23■■□□□ 1.31
SUMO3-205ENST00000466861 BAHD1Q8TBE0 780 aaPredicted RBP23.23■■□□□ 1.31
SUMO3-205ENST00000466861 SETD7Q8WTS6 366 aaKnown RBP23.23■■□□□ 1.31
SUMO3-205ENST00000466861 FICDQ9BVA6 458 aa23.23■■□□□ 1.31
SUMO3-205ENST00000466861 OR1A2Q9Y585 309 aa23.23■■□□□ 1.31
SUMO3-205ENST00000466861 DGKBQ9Y6T7 804 aa23.23■■□□□ 1.31
SUMO3-205ENST00000466861 LRP4O75096 1905 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms