RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 TRIM16O95361 564 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 CLDN7O95471 211 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 LDOC1O95751 146 aaPredicted RBP12.88□□□□□ -0.35
COL5A1-206ENST00000465877 NDST3O95803 873 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 SLC4A1P02730 911 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 ATXN1LP0C7T5 689 aaKnown RBP12.88□□□□□ -0.35
COL5A1-206ENST00000465877 GIMD1P0DJR0 217 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 ALPPL2P10696 532 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 MYCLP1P12525 358 aaPredicted RBP12.88□□□□□ -0.35
COL5A1-206ENST00000465877 ACADVLP49748 655 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 BLKP51451 505 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 DNAJC3Q13217 504 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 HS1BP3Q53T59 392 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 PRRT3Q5FWE3 981 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 MEI1Q5TIA1 1274 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 ITPRIPL1Q6GPH6 555 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 PNCKQ6P2M8 343 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 DARS2Q6PI48 645 aaKnown RBP12.88□□□□□ -0.35
COL5A1-206ENST00000465877 KDELC1Q6UW63 502 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 ENPP7Q6UWV6 458 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 RFLNAQ6ZTI6 216 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 NYAP1Q6ZVC0 841 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 ZNF765Q7L2R6 523 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 LYSMD3Q7Z3D4 306 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 KDELC2Q7Z4H8 507 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 TECPR1Q7Z6L1 1165 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 TTC13Q8NBP0 860 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 TRIM58Q8NG06 486 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 ATL2Q8NHH9 583 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 AP2M1Q96CW1 435 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 TBATAQ96M53 351 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 FCRL5Q96RD9 977 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 SLC13A1Q9BZW2 595 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 FGF22Q9HCT0 170 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 PHPT1Q9NRX4 125 aaPredicted RBP12.88□□□□□ -0.35
COL5A1-206ENST00000465877 NLGN3Q9NZ94 848 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 SPASTQ9UBP0 616 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 FAM153AQ9UHL3 310 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 TRHDEQ9UKU6 1024 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 ANGPTL2Q9UKU9 493 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 ZNF711Q9Y462 761 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 TCRBV7S2A1N4TA0A589 114 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 TMEM202A6NGA9 273 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 TRIM38O00635 465 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 SCAMP1O15126 338 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 SIGLEC6O43699 453 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 STK10O94804 968 aaKnown RBP12.87□□□□□ -0.35
COL5A1-206ENST00000465877 DKK1O94907 266 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 RASGRP1O95267 797 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 SOD1P00441 154 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 HOXC4P09017 264 aaPredicted RBP12.87□□□□□ -0.35
COL5A1-206ENST00000465877 PIRTP0C851 137 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 KELP23276 732 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 PSMB4P28070 264 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 TEAD1P28347 426 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 TRIM23P36406 574 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 TNNT3P45378 269 aaPredicted RBP12.87□□□□□ -0.35
COL5A1-206ENST00000465877 HK3P52790 923 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 WNT3AP56704 352 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 SHC2P98077 582 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 CDK3Q00526 305 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 PPARDQ03181 441 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 PTSQ03393 145 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 DPTQ07507 201 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 MPP3Q13368 585 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 CDKN3Q16667 212 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 PROX2Q3B8N5 592 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 KCTD16Q68DU8 428 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 PID1Q7Z2X4 250 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 RAB44Q7Z6P3 723 aaPredicted RBP12.87□□□□□ -0.35
COL5A1-206ENST00000465877 SLCO6A1Q86UG4 719 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 HID1Q8IV36 788 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 RAVER1Q8IY67 606 aaKnown RBP12.87□□□□□ -0.35
COL5A1-206ENST00000465877 PNPLA1Q8N8W4 532 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 IPMKQ8NFU5 416 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 OR56A4Q8NGH8 313 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 LMX1AQ8TE12 382 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 UBE2Q2Q8WVN8 375 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 ADAMTS14Q8WXS8 1223 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 TSACCQ96A04 125 aaPredicted RBP12.87□□□□□ -0.35
COL5A1-206ENST00000465877 MRGPRX2Q96LB1 330 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 SPATA13Q96N96 652 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 GORASP1Q9BQQ3 440 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 LGR4Q9BXB1 951 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 FSD1LQ9BXM9 530 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 TEX101Q9BY14 249 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 ABCG8Q9H221 673 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 CARD9Q9H257 536 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 KCNF1Q9H3M0 494 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 PKD2L2Q9NZM6 624 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 WASF3Q9UPY6 502 aa12.87□□□□□ -0.35
COL5A1-206ENST00000465877 R3HDM2Q9Y2K5 976 aaKnown RBP12.87□□□□□ -0.35
COL5A1-206ENST00000465877 ARHGEF17Q96PE2 2063 aaPredicted RBP12.86□□□□□ -0.35
COL5A1-206ENST00000465877 NEMP2A6NFY4 417 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 HYAL3O43820 417 aaPredicted RBP12.86□□□□□ -0.35
COL5A1-206ENST00000465877 TOP3BO95985 862 aaKnown RBP12.86□□□□□ -0.35
COL5A1-206ENST00000465877 PYGLP06737 847 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 CELA2BP08218 269 aaPredicted RBP12.86□□□□□ -0.35
COL5A1-206ENST00000465877 CHRNA4P43681 627 aa12.86□□□□□ -0.35
COL5A1-206ENST00000465877 GPR1P46091 355 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms