RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 WDR70Q9NW82 654 aa21.02■□□□□ 0.96
VSX1-206ENST00000444511 ATXN7L1Q9ULK2 861 aaPredicted RBP21.02■□□□□ 0.96
VSX1-206ENST00000444511 BPTFQ12830 3046 aa21.02■□□□□ 0.95
VSX1-206ENST00000444511 NUDT21O43809 227 aaKnown RBP21.01■□□□□ 0.95
VSX1-206ENST00000444511 MFSD11O43934 449 aa21.01■□□□□ 0.95
VSX1-206ENST00000444511 CEACAM5P06731 702 aa21.01■□□□□ 0.95
VSX1-206ENST00000444511 JMJD7P0C870 316 aa21.01■□□□□ 0.95
VSX1-206ENST00000444511 GNPDA1P46926 289 aa21.01■□□□□ 0.95
VSX1-206ENST00000444511 CDK3Q00526 305 aa21.01■□□□□ 0.95
VSX1-206ENST00000444511 PTPRRQ15256 657 aa21.01■□□□□ 0.95
VSX1-206ENST00000444511 SPRED1Q7Z699 444 aa21.01■□□□□ 0.95
VSX1-206ENST00000444511 JAMLQ86YT9 394 aa21.01■□□□□ 0.95
VSX1-206ENST00000444511 TEX26Q8N6G2 289 aa21.01■□□□□ 0.95
VSX1-206ENST00000444511 FAM71BQ8TC56 605 aa21.01■□□□□ 0.95
VSX1-206ENST00000444511 GPBAR1Q8TDU6 330 aa21.01■□□□□ 0.95
VSX1-206ENST00000444511 FRMD8Q9BZ67 464 aaPredicted RBP21.01■□□□□ 0.95
VSX1-206ENST00000444511 HAUS2Q9NVX0 235 aa21.01■□□□□ 0.95
VSX1-206ENST00000444511 TRNAU1APQ9NX07 287 aaKnown RBP21.01■□□□□ 0.95
VSX1-206ENST00000444511 PCDHGA7Q9Y5G6 932 aa21.01■□□□□ 0.95
VSX1-206ENST00000444511 SHROOM3Q8TF72 1996 aa21.01■□□□□ 0.95
VSX1-206ENST00000444511 C1QL1O75973 258 aa21■□□□□ 0.95
VSX1-206ENST00000444511 GYPCP04921 128 aa21■□□□□ 0.95
VSX1-206ENST00000444511 HGFP14210 728 aa21■□□□□ 0.95
VSX1-206ENST00000444511 GARSP41250 739 aaKnown RBP21■□□□□ 0.95
VSX1-206ENST00000444511 GALNT2Q10471 571 aa21■□□□□ 0.95
VSX1-206ENST00000444511 CLN3Q13286 438 aa21■□□□□ 0.95
VSX1-206ENST00000444511 DPYSL3Q14195 570 aa21■□□□□ 0.95
VSX1-206ENST00000444511 ZSCAN23Q3MJ62 389 aa21■□□□□ 0.95
VSX1-206ENST00000444511 TIGD7Q6NT04 549 aaPredicted RBP21■□□□□ 0.95
VSX1-206ENST00000444511 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21■□□□□ 0.95
VSX1-206ENST00000444511 KCTD6Q8NC69 237 aa21■□□□□ 0.95
VSX1-206ENST00000444511 ZDHHC1Q8WTX9 485 aa21■□□□□ 0.95
VSX1-206ENST00000444511 PIH1D2Q8WWB5 315 aa21■□□□□ 0.95
VSX1-206ENST00000444511 SPATS2LQ9NUQ6 558 aaKnown RBP21■□□□□ 0.95
VSX1-206ENST00000444511 IFNKQ9P0W0 207 aa21■□□□□ 0.95
VSX1-206ENST00000444511 CTTNBP2NLQ9P2B4 639 aa21■□□□□ 0.95
VSX1-206ENST00000444511 PISDQ9UG56 409 aa21■□□□□ 0.95
VSX1-206ENST00000444511 SUFUQ9UMX1 484 aa21■□□□□ 0.95
VSX1-206ENST00000444511 SSUH2Q9Y2M2 353 aa21■□□□□ 0.95
VSX1-206ENST00000444511 PPIL1Q9Y3C6 166 aa21■□□□□ 0.95
VSX1-206ENST00000444511 TTLL3Q9Y4R7 772 aa21■□□□□ 0.95
VSX1-206ENST00000444511 PDHA1P08559 390 aa20.99■□□□□ 0.95
VSX1-206ENST00000444511 TEAD1P28347 426 aa20.99■□□□□ 0.95
VSX1-206ENST00000444511 SLC5A2P31639 672 aa20.99■□□□□ 0.95
VSX1-206ENST00000444511 GPR1P46091 355 aa20.99■□□□□ 0.95
VSX1-206ENST00000444511 ARSEP51690 589 aa20.99■□□□□ 0.95
VSX1-206ENST00000444511 EPHB1P54762 984 aa20.99■□□□□ 0.95
VSX1-206ENST00000444511 PAFAH1B3Q15102 231 aaKnown RBP20.99■□□□□ 0.95
VSX1-206ENST00000444511 ATP13A4Q4VNC1 1196 aa20.99■□□□□ 0.95
VSX1-206ENST00000444511 LRRC66Q68CR7 880 aa20.99■□□□□ 0.95
VSX1-206ENST00000444511 NCBP2-AS2Q69YL0 99 aa20.99■□□□□ 0.95
VSX1-206ENST00000444511 PCSK4Q6UW60 755 aa20.99■□□□□ 0.95
VSX1-206ENST00000444511 CCDC81Q6ZN84 652 aa20.99■□□□□ 0.95
VSX1-206ENST00000444511 NRROSQ86YC3 692 aa20.99■□□□□ 0.95
VSX1-206ENST00000444511 ZNF670Q9BS34 389 aa20.99■□□□□ 0.95
VSX1-206ENST00000444511 TAAR2Q9P1P5 351 aa20.99■□□□□ 0.95
VSX1-206ENST00000444511 CD84Q9UIB8 345 aa20.99■□□□□ 0.95
VSX1-206ENST00000444511 LOXL2Q9Y4K0 774 aa20.99■□□□□ 0.95
VSX1-206ENST00000444511 RHPN2P1A8MT19 583 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 AGRPO00253 132 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 MATN3O15232 486 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 FZD6O60353 706 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 PROSCO94903 275 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 MAP3K6O95382 1288 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 FUCA1P04066 466 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 FGF1P05230 155 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 CASP14P31944 242 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 MAZP56270 477 aaKnown RBP20.98■□□□□ 0.95
VSX1-206ENST00000444511 CFHR1Q03591 330 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 ZFP36L1Q07352 338 aaKnown RBP20.98■□□□□ 0.95
VSX1-206ENST00000444511 DPTQ07507 201 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 BIRC2Q13490 618 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 PDK2Q15119 407 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 IFI16Q16666 785 aaKnown RBP20.98■□□□□ 0.95
VSX1-206ENST00000444511 MAP9Q49MG5 647 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 ANKRD20A8PQ5CZ79 823 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 DOK6Q6PKX4 331 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 SLC30A9Q6PML9 568 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 TECPR1Q7Z6L1 1165 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 MAP7D3Q8IWC1 876 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 SNRNP27Q8WVK2 155 aaKnown RBP20.98■□□□□ 0.95
VSX1-206ENST00000444511 CTNNBL1Q8WYA6 563 aaPredicted RBP20.98■□□□□ 0.95
VSX1-206ENST00000444511 MAML1Q92585 1016 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 TMEM159Q96B96 161 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 AP2M1Q96CW1 435 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 RBM22Q9NW64 420 aaKnown RBP eCLIP20.98■□□□□ 0.95
VSX1-206ENST00000444511 UVRAGQ9P2Y5 699 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 SLC17A4Q9Y2C5 497 aa20.98■□□□□ 0.95
VSX1-206ENST00000444511 A0A0J9YYE9 177 aa20.97■□□□□ 0.95
VSX1-206ENST00000444511 A0A0U1RQS6 177 aa20.97■□□□□ 0.95
VSX1-206ENST00000444511 K7ENP7 123 aa20.97■□□□□ 0.95
VSX1-206ENST00000444511 ZW10O43264 779 aa20.97■□□□□ 0.95
VSX1-206ENST00000444511 TRBC1P01850 177 aa20.97■□□□□ 0.95
VSX1-206ENST00000444511 IVLP07476 585 aa20.97■□□□□ 0.95
VSX1-206ENST00000444511 ZNF30P17039 623 aa20.97■□□□□ 0.95
VSX1-206ENST00000444511 CA4P22748 312 aa20.97■□□□□ 0.95
VSX1-206ENST00000444511 CES1P23141 567 aa20.97■□□□□ 0.95
VSX1-206ENST00000444511 CCNCP24863 283 aa20.97■□□□□ 0.95
VSX1-206ENST00000444511 AK4P27144 223 aaPredicted RBP20.97■□□□□ 0.95
VSX1-206ENST00000444511 POLD2P49005 469 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms