RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 RPN2P04844 631 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 GRK4P32298 578 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 APLP1P51693 650 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 CDH13P55290 713 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 OLR1P78380 273 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 SH3D19Q5HYK7 790 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 DGKKQ5KSL6 1271 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 USP45Q70EL2 814 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 OFCC1Q8IZS5 231 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 POC5Q8NA72 575 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 OR2T12Q8NG77 320 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 PNPT1Q8TCS8 783 aaKnown RBP8.39□□□□□ -1.07
VPS36-201ENST00000378060 MED8Q96G25 268 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 FAM84AQ96KN4 292 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 CLN6Q9NWW5 311 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 RAPGEFL1Q9UHV5 662 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 HES2Q9Y543 173 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 C2orf71A6NGG8 1288 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 TTLL13PA6NNM8 815 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 GUCY1B2O75343 617 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 SLC10A3P09131 477 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 ICAM3P32942 547 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 CCNHP51946 323 aaPredicted RBP8.39□□□□□ -1.07
VPS36-201ENST00000378060 CYP2A13Q16696 494 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 KCTD19Q17RG1 926 aaPredicted RBP8.39□□□□□ -1.07
VPS36-201ENST00000378060 PABPC1LQ4VXU2 614 aaKnown RBP8.39□□□□□ -1.07
VPS36-201ENST00000378060 TIGD2Q4W5G0 525 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 USP39Q53GS9 565 aaKnown RBP8.39□□□□□ -1.07
VPS36-201ENST00000378060 FAM117BQ6P1L5 589 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 EIF3MQ7L2H7 374 aaKnown RBP8.39□□□□□ -1.07
VPS36-201ENST00000378060 FGD2Q7Z6J4 655 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 C11orf74Q86VG3 221 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 MON1AQ86VX9 555 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 C1orf127Q8N9H9 656 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 COPS5Q92905 334 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 ROPN1LQ96C74 230 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 CENPNQ96H22 339 aaPredicted RBP8.39□□□□□ -1.07
VPS36-201ENST00000378060 ITCHQ96J02 903 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 FCRL2Q96LA5 508 aaPredicted RBP8.39□□□□□ -1.07
VPS36-201ENST00000378060 TINF2Q9BSI4 451 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 SPRTNQ9H040 489 aaPredicted RBP8.39□□□□□ -1.07
VPS36-201ENST00000378060 CLEC4MQ9H2X3 399 aaPredicted RBP8.39□□□□□ -1.07
VPS36-201ENST00000378060 EPB41L1Q9H4G0 881 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 GALNT8Q9NY28 637 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 BTRCQ9Y297 605 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 SNX8Q9Y5X2 465 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 FOXO6A8MYZ6 492 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 SPTLC1O15269 473 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 GSSP48637 474 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 ALDH9A1P49189 494 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 SCNN1GP51170 649 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 RPL38P63173 70 aaKnown RBP8.39□□□□□ -1.07
VPS36-201ENST00000378060 MTX3Q5HYI7 312 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 EMC10Q5UCC4 262 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 C9orf57Q5W0N0 161 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 GK5Q6ZS86 529 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 ST13P5Q8NFI4 369 aaPredicted RBP8.39□□□□□ -1.07
VPS36-201ENST00000378060 CMASQ8NFW8 434 aaPredicted RBP8.39□□□□□ -1.07
VPS36-201ENST00000378060 PIK3R5Q8WYR1 880 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 PGLYRP2Q96PD5 576 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 GBA3Q9H227 469 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 C12orf65Q9H3J6 166 aaKnown RBP8.39□□□□□ -1.07
VPS36-201ENST00000378060 EHD3Q9NZN3 535 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 VPS51Q9UID3 782 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 IKZF3Q9UKT9 509 aa8.39□□□□□ -1.07
VPS36-201ENST00000378060 MFSD11O43934 449 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 NPHS1O60500 1241 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 TSPAN8P19075 237 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 CRYBB1P53674 252 aaPredicted RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 RPL26P61254 145 aaKnown RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 EIF2B5Q13144 721 aaKnown RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 PERM1Q5SV97 790 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 RAP1GAP2Q684P5 730 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 ZNF57Q68EA5 555 aaPredicted RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 THAP5Q7Z6K1 395 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 HIPK1Q86Z02 1210 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 UBR7Q8N806 425 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 NAT8LQ8N9F0 302 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 SOCS4Q8WXH5 440 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 CAPNS2Q96L46 248 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 C12orf42Q96LP6 360 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 MRPL45Q9BRJ2 306 aaKnown RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 B3GNT5Q9BYG0 378 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.38□□□□□ -1.07
VPS36-201ENST00000378060 ARHGEF4Q9NR80 690 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 SMPD3Q9NY59 655 aaPredicted RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 CPA4Q9UI42 421 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 ERGIC3Q9Y282 383 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 GIT1Q9Y2X7 761 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 SAMHD1Q9Y3Z3 626 aaKnown RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 H0YGN5 161 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 AREL1O15033 823 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 BUD23O43709 281 aaKnown RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 RNASEH1O60930 286 aaKnown RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 CNMDO75829 334 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 NADKO95544 446 aaPredicted RBP8.38□□□□□ -1.07
VPS36-201ENST00000378060 LINC00032P0C843 101 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 CCNCP24863 283 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 PEX2P28328 305 aa8.38□□□□□ -1.07
VPS36-201ENST00000378060 PBLDP30039 288 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms