RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 FKBPLQ9UIM3 349 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 PRKAB1Q9Y478 270 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 PCDHB12Q9Y5F1 795 aa9.11□□□□□ -0.95
SMARCA1-202ENST00000371122 MTA2O94776 668 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 EDN1P05305 212 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 IQCF3P0C7M6 154 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 ACVRL1P37023 503 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 DGKEP52429 567 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 SLC25A11Q02978 314 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 SOX4Q06945 474 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 PLA2G4EQ3MJ16 856 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 VARS2Q5ST30 1063 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 RBM20Q5T481 1227 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 GPR107Q5VW38 600 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 NCBP2-AS2Q69YL0 99 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 FBXL19Q6PCT2 694 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 DCLRE1AQ6PJP8 1040 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 DCAKDQ8WVC6 231 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 CLIP3Q96DZ5 547 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 APOLD1Q96LR9 279 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 QKIQ96PU8 341 aaKnown RBP eCLIP9.1□□□□□ -0.952e-7■■■■■ 48.3
SMARCA1-202ENST00000371122 C2orf49Q9BVC5 232 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 C6orf62Q9GZU0 229 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 ZFYVE1Q9HBF4 777 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 PCDH10Q9P2E7 1040 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 SLC7A8Q9UHI5 535 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 CNOT6Q9ULM6 557 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 A0A0G2JLL6 359 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 CCDC189A1A4V9 331 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 FGF10O15520 208 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 H2AFYO75367 372 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 DEAF1O75398 565 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 EIF2S1P05198 315 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 ACRP10323 421 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 COX7A2P14406 83 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 ATP6V1C1P21283 382 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 LPOP22079 712 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 S100A5P33763 92 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 MAPK9P45984 424 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 PRKG2Q13237 762 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 SIM2Q14190 667 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 INTS6LQ5JSJ4 861 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 ARCQ7LC44 396 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 EFL1Q7Z2Z2 1120 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 PRRT2Q7Z6L0 340 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 HERC6Q8IVU3 1022 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 HNRNPABQ99729 332 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 XYLT2Q9H1B5 865 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 CCSER2Q9H7U1 834 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 FBRSL1Q9HCM7 1045 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 RASSF1Q9NS23 344 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 C6orf203Q9P0P8 240 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 CDH22Q9UJ99 828 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 MYOCOSA0A1B0GUC4 107 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 NEDD8-MDP1E9PL57 170 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 CNTN5O94779 1100 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 RTN3O95197 1032 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 SLC25A14O95258 325 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 SLC1A2P43004 574 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 IDH3AP50213 366 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 AFF1P51825 1210 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 SMYD5Q6GMV2 418 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 FAM124AQ86V42 546 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 ZNF276Q8N554 614 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 C10orf53Q8N6V4 93 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 PQLC3Q8N755 202 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 C10orf82Q8WW14 230 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 FAM126AQ9BYI3 521 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 MYRFQ9Y2G1 1151 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 SNAP91O60641 907 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 OR4F21O95013 312 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 IGSF6O95976 241 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 GKP32189 559 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 LIMK2P53671 638 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 CRHR2Q13324 411 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 SETMARQ53H47 684 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 ALFQ53S48 1182 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 ZC3H7AQ8IWR0 971 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 TRIM48Q8IWZ4 208 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 BDH2Q9BUT1 245 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 SPAG4Q9NPE6 437 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 COMMD8Q9NX08 183 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 CFAP97Q9P2B7 532 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 EIF2B4Q9UI10 523 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 PPM1HQ9ULR3 514 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 GTF2A1LQ9UNN4 478 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 GIT1Q9Y2X7 761 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 RAI2Q9Y5P3 530 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 PTCH2Q9Y6C5 1203 aa9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 ZFP37Q9Y6Q3 630 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-202ENST00000371122 DDX60LQ5H9U9 1706 aaKnown RBP9.09□□□□□ -0.95
SMARCA1-202ENST00000371122 TMEM114B3SHH9 223 aa9.09□□□□□ -0.95
SMARCA1-202ENST00000371122 NIPSNAP2O75323 286 aa9.09□□□□□ -0.95
SMARCA1-202ENST00000371122 ERAL1O75616 437 aaKnown RBP9.09□□□□□ -0.95
SMARCA1-202ENST00000371122 IPO13O94829 963 aaKnown RBP9.09□□□□□ -0.95
SMARCA1-202ENST00000371122 GOT2P00505 430 aaKnown RBP9.09□□□□□ -0.95
SMARCA1-202ENST00000371122 MLNP12872 115 aa9.09□□□□□ -0.95
SMARCA1-202ENST00000371122 SERPINA4P29622 427 aa9.09□□□□□ -0.95
SMARCA1-202ENST00000371122 CLCN5P51795 746 aa9.09□□□□□ -0.95
SMARCA1-202ENST00000371122 AQP4P55087 323 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms