RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 CHID1Q9BWS9 393 aa17.82■□□□□ 0.44
APP-202ENST00000348990 TCAF1Q9Y4C2 921 aa17.82■□□□□ 0.44
APP-202ENST00000348990 NCF1BA6NI72 391 aaPredicted RBP17.82■□□□□ 0.44
APP-202ENST00000348990 NCF1CA8MVU1 366 aaPredicted RBP17.82■□□□□ 0.44
APP-202ENST00000348990 GMNNO75496 209 aa17.82■□□□□ 0.44
APP-202ENST00000348990 NCF1P14598 390 aaPredicted RBP17.82■□□□□ 0.44
APP-202ENST00000348990 ALDH4A1P30038 563 aa17.82■□□□□ 0.44
APP-202ENST00000348990 ACADVLP49748 655 aa17.82■□□□□ 0.44
APP-202ENST00000348990 DIO3P55073 304 aa17.82■□□□□ 0.44
APP-202ENST00000348990 DNAJB13P59910 316 aa17.82■□□□□ 0.44
APP-202ENST00000348990 LARP4Q71RC2 724 aaKnown RBP eCLIP17.82■□□□□ 0.44
APP-202ENST00000348990 CRYBG2Q8N1P7 616 aa17.82■□□□□ 0.44
APP-202ENST00000348990 TWIST2Q8WVJ9 160 aa17.82■□□□□ 0.44
APP-202ENST00000348990 TANKQ92844 425 aa17.82■□□□□ 0.44
APP-202ENST00000348990 PABPC5Q96DU9 382 aaKnown RBP17.82■□□□□ 0.44
APP-202ENST00000348990 BDH2Q9BUT1 245 aa17.82■□□□□ 0.44
APP-202ENST00000348990 SEMA4BQ9NPR2 832 aaPredicted RBP17.82■□□□□ 0.44
APP-202ENST00000348990 GTF2IRD1Q9UHL9 959 aa17.82■□□□□ 0.44
APP-202ENST00000348990 UBQLN1Q9UMX0 589 aaKnown RBP17.82■□□□□ 0.44
APP-202ENST00000348990 SNX5Q9Y5X3 404 aa17.82■□□□□ 0.44
APP-202ENST00000348990 PSMD3O43242 534 aa17.81■□□□□ 0.44
APP-202ENST00000348990 GPX3P22352 226 aa17.81■□□□□ 0.44
APP-202ENST00000348990 PGS1Q32NB8 556 aa17.81■□□□□ 0.44
APP-202ENST00000348990 HECTD2Q5U5R9 776 aa17.81■□□□□ 0.44
APP-202ENST00000348990 WSCD1Q658N2 575 aa17.81■□□□□ 0.44
APP-202ENST00000348990 PRMT9Q6P2P2 845 aa17.81■□□□□ 0.44
APP-202ENST00000348990 RIOX2Q8IUF8 465 aa17.81■□□□□ 0.44
APP-202ENST00000348990 TSPAN17Q96FV3 270 aa17.81■□□□□ 0.44
APP-202ENST00000348990 FEM1CQ96JP0 617 aa17.81■□□□□ 0.44
APP-202ENST00000348990 MYRFLQ96LU7 910 aa17.81■□□□□ 0.44
APP-202ENST00000348990 LHPPQ9H008 270 aa17.81■□□□□ 0.44
APP-202ENST00000348990 SUN2Q9UH99 717 aa17.81■□□□□ 0.44
APP-202ENST00000348990 SARDHQ9UL12 918 aa17.81■□□□□ 0.44
APP-202ENST00000348990 PSME2Q9UL46 239 aa17.81■□□□□ 0.44
APP-202ENST00000348990 VWA7Q9Y334 891 aa17.81■□□□□ 0.44
APP-202ENST00000348990 RAD54BQ9Y620 910 aa17.81■□□□□ 0.44
APP-202ENST00000348990 OR51F1A6NGY5 319 aa17.81■□□□□ 0.44
APP-202ENST00000348990 KCNC1P48547 511 aa17.81■□□□□ 0.44
APP-202ENST00000348990 PCYT1AP49585 367 aa17.81■□□□□ 0.44
APP-202ENST00000348990 FOXA1P55317 472 aa17.81■□□□□ 0.44
APP-202ENST00000348990 TNK2Q07912 1038 aa17.81■□□□□ 0.44
APP-202ENST00000348990 TIGD2Q4W5G0 525 aa17.81■□□□□ 0.44
APP-202ENST00000348990 LRRC52Q8N7C0 313 aa17.81■□□□□ 0.44
APP-202ENST00000348990 CHPT1Q8WUD6 406 aa17.81■□□□□ 0.44
APP-202ENST00000348990 NSUN5Q96P11 429 aaKnown RBP17.81■□□□□ 0.44
APP-202ENST00000348990 ERGIC3Q9Y282 383 aa17.81■□□□□ 0.44
APP-202ENST00000348990 KPNA6O60684 536 aa17.8■□□□□ 0.44
APP-202ENST00000348990 CNOT3O75175 753 aaKnown RBP17.8■□□□□ 0.44
APP-202ENST00000348990 XYLBO75191 536 aa17.8■□□□□ 0.44
APP-202ENST00000348990 STAU1O95793 577 aaKnown RBP17.8■□□□□ 0.44
APP-202ENST00000348990 EDNRBP24530 442 aa17.8■□□□□ 0.44
APP-202ENST00000348990 ARNTP27540 789 aa17.8■□□□□ 0.44
APP-202ENST00000348990 OPRL1P41146 370 aa17.8■□□□□ 0.44
APP-202ENST00000348990 SH3BP2P78314 561 aa17.8■□□□□ 0.44
APP-202ENST00000348990 DNASE1L3Q13609 305 aa17.8■□□□□ 0.44
APP-202ENST00000348990 FAM187BQ17R55 369 aa17.8■□□□□ 0.44
APP-202ENST00000348990 FAM117BQ6P1L5 589 aa17.8■□□□□ 0.44
APP-202ENST00000348990 DCBLD1Q8N8Z6 715 aa17.8■□□□□ 0.44
APP-202ENST00000348990 ZNF560Q96MR9 790 aa17.8■□□□□ 0.44
APP-202ENST00000348990 FBXW11Q9UKB1 542 aa17.8■□□□□ 0.44
APP-202ENST00000348990 PIN4Q9Y237 131 aaKnown RBP17.8■□□□□ 0.44
APP-202ENST00000348990 DNAJC15Q9Y5T4 150 aa17.8■□□□□ 0.44
APP-202ENST00000348990 KRBA1A5PL33 1030 aa17.8■□□□□ 0.44
APP-202ENST00000348990 AZIN1O14977 448 aa17.8■□□□□ 0.44
APP-202ENST00000348990 LBPP18428 481 aa17.8■□□□□ 0.44
APP-202ENST00000348990 RFC2P35250 354 aa17.8■□□□□ 0.44
APP-202ENST00000348990 HLCSP50747 726 aa17.8■□□□□ 0.44
APP-202ENST00000348990 MAXP61244 160 aa17.8■□□□□ 0.44
APP-202ENST00000348990 GALNT2Q10471 571 aa17.8■□□□□ 0.44
APP-202ENST00000348990 TBPL2Q6SJ96 375 aa17.8■□□□□ 0.44
APP-202ENST00000348990 BTLAQ7Z6A9 289 aa17.8■□□□□ 0.44
APP-202ENST00000348990 GABPB2Q8TAK5 448 aaPredicted RBP17.8■□□□□ 0.44
APP-202ENST00000348990 TRUB1Q8WWH5 349 aaKnown RBP17.8■□□□□ 0.44
APP-202ENST00000348990 GSTO2Q9H4Y5 243 aa17.8■□□□□ 0.44
APP-202ENST00000348990 GLOD4Q9HC38 313 aa17.8■□□□□ 0.44
APP-202ENST00000348990 ZNF229Q9UJW7 825 aa17.8■□□□□ 0.44
APP-202ENST00000348990 GPC6Q9Y625 555 aaPredicted RBP17.8■□□□□ 0.44
APP-202ENST00000348990 MGAMO43451 1857 aa17.8■□□□□ 0.44
APP-202ENST00000348990 GSTT2P0CG29 244 aa17.8■□□□□ 0.44
APP-202ENST00000348990 GSTT2BP0CG30 244 aa17.8■□□□□ 0.44
APP-202ENST00000348990 IMPDH1P20839 514 aa17.8■□□□□ 0.44
APP-202ENST00000348990 SCNN1AP37088 669 aa17.8■□□□□ 0.44
APP-202ENST00000348990 RAB15P59190 212 aa17.8■□□□□ 0.44
APP-202ENST00000348990 OSTM1Q86WC4 334 aa17.8■□□□□ 0.44
APP-202ENST00000348990 IFNLR1Q8IU57 520 aaPredicted RBP17.8■□□□□ 0.44
APP-202ENST00000348990 HERC2P3Q9BVR0 1158 aa17.8■□□□□ 0.44
APP-202ENST00000348990 EXD2Q9NVH0 621 aa17.8■□□□□ 0.44
APP-202ENST00000348990 BBIP1A8MTZ0 92 aa17.79■□□□□ 0.44
APP-202ENST00000348990 E2F6O75461 281 aa17.79■□□□□ 0.44
APP-202ENST00000348990 GPIP06744 558 aa17.79■□□□□ 0.44
APP-202ENST00000348990 GEMP55040 296 aa17.79■□□□□ 0.44
APP-202ENST00000348990 TAF2Q6P1X5 1199 aa17.79■□□□□ 0.44
APP-202ENST00000348990 CLEC20AQ6ZU45 233 aa17.79■□□□□ 0.44
APP-202ENST00000348990 R3HCC1LQ7Z5L2 792 aaKnown RBP17.79■□□□□ 0.44
APP-202ENST00000348990 TBC1D21Q8IYX1 336 aa17.79■□□□□ 0.44
APP-202ENST00000348990 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.79■□□□□ 0.447e-7■■■■■ 60.2
APP-202ENST00000348990 NSMCE2Q96MF7 247 aa17.79■□□□□ 0.44
APP-202ENST00000348990 HNRNPABQ99729 332 aaKnown RBP17.79■□□□□ 0.44
APP-202ENST00000348990 CORO1BQ9BR76 489 aa17.79■□□□□ 0.44
APP-202ENST00000348990 BRD8Q9H0E9 1235 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms