RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 PNPT1Q8TCS8 783 aaKnown RBP16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 HOPXQ9BPY8 73 aaPredicted RBP16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 CXCL11O14625 94 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 DYRK3O43781 588 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 CCNE2O96020 404 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 RPLP2P05387 115 aaKnown RBP16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 WARSP23381 471 aaKnown RBP16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 PFKPQ01813 784 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 PPM1LQ5SGD2 360 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 FAR1Q8WVX9 515 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 NLNQ9BYT8 704 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 CMTM6Q9NX76 183 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 ADGRE2Q9UHX3 823 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 EFR3BQ9Y2G0 817 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 UGT1A9O60656 530 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 UGT1A6P19224 532 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 UGT1A1P22309 533 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 UGT1A4P22310 534 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 UGT1A3P35503 534 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 UGT1A5P35504 534 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 CDK9P50750 372 aaKnown RBP16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 CDK18Q07002 472 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 INSCQ1MX18 579 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 CYP4X1Q8N118 509 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 CAMKK1Q8N5S9 505 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 OR4L1Q8NH43 312 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 LHX5Q9H2C1 402 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 UGT1A7Q9HAW7 530 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 UGT1A10Q9HAW8 530 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 UGT1A8Q9HAW9 530 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 RGS20O76081 388 aa16.46■□□□□ 0.22
SH3RF1-201ENST00000284637 ATP6V0D1P61421 351 aa16.46■□□□□ 0.22
SH3RF1-201ENST00000284637 SPIBQ01892 262 aa16.46■□□□□ 0.22
SH3RF1-201ENST00000284637 RFX4Q33E94 735 aa16.46■□□□□ 0.22
SH3RF1-201ENST00000284637 SETMARQ53H47 684 aaPredicted RBP16.46■□□□□ 0.22
SH3RF1-201ENST00000284637 CYP20A1Q6UW02 462 aa16.46■□□□□ 0.22
SH3RF1-201ENST00000284637 USP45Q70EL2 814 aa16.46■□□□□ 0.22
SH3RF1-201ENST00000284637 ADAMTSL2Q86TH1 951 aa16.46■□□□□ 0.22
SH3RF1-201ENST00000284637 CLHC1Q8NHS4 586 aa16.46■□□□□ 0.22
SH3RF1-201ENST00000284637 COL26A1Q96A83 441 aa16.46■□□□□ 0.22
SH3RF1-201ENST00000284637 RASSF1Q9NS23 344 aa16.46■□□□□ 0.22
SH3RF1-201ENST00000284637 N6AMT1Q9Y5N5 214 aa16.46■□□□□ 0.22
SH3RF1-201ENST00000284637 TRPV2Q9Y5S1 764 aa16.46■□□□□ 0.22
SH3RF1-201ENST00000284637 SIM2Q14190 667 aaPredicted RBP16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 ADGRE1Q14246 886 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 ZNF829Q3KNS6 432 aaPredicted RBP16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 VPS26BQ4G0F5 336 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 GALNT5Q7Z7M9 940 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 OR2T34Q8NGX1 318 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 OR2T3Q8NH03 318 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 GRIN3AQ8TCU5 1115 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 SLITRK2Q9H156 845 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 PTGFRNQ9P2B2 879 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 LOC110117498-PIK3R3F6TDL0 507 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 FARP2O94887 1054 aaPredicted RBP16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 FADS2O95864 444 aaKnown RBP16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 GLYATQ6IB77 296 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 NIPAL1Q6NVV3 410 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 MZT2AQ6P582 158 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 OTOP3Q7RTS5 596 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 KRT77Q7Z794 578 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 PROSER1Q86XN7 944 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 FAM156AQ8NDB6 213 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 NELL1Q92832 810 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 ENTPD4Q9Y227 616 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 PCDHGA3Q9Y5H0 932 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 SLC28A1O00337 649 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 NOS1APO75052 506 aaPredicted RBP16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 HNF4AP41235 474 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 PHC1P78364 1004 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 CBR4Q8N4T8 237 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 FCRL2Q96LA5 508 aaPredicted RBP16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 TRMOQ9BU70 441 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 MAGEL2Q9UJ55 1249 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 PPP2R3BQ9Y5P8 575 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 MFSD11O43934 449 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 OR10H3O60404 316 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 KPNA6O60684 536 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 CYP2A6P11509 494 aaPredicted RBP16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 ATF4P18848 351 aaPredicted RBP16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 TPSB2P20231 275 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 POLR2LP62875 67 aaKnown RBP16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 TPSAB1Q15661 275 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 SLC25A52Q3SY17 297 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 SH3D19Q5HYK7 790 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 FAM20CQ8IXL6 584 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 PGAM4Q8N0Y7 254 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 BSNDQ8WZ55 320 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 PHF12Q96QT6 1004 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 DNAJC28Q9NX36 388 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 VPS51Q9UID3 782 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 SLC9A8Q9Y2E8 581 aa16.45■□□□□ 0.22
SH3RF1-201ENST00000284637 A0A1W2PQ72 361 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 H3BSA7 217 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 HAT1O14929 419 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 IPO13O94829 963 aaKnown RBP16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 LGALS3BPQ08380 585 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 TLDC1Q6P9B6 456 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 TXNDC11Q6PKC3 985 aa16.44■□□□□ 0.22
SH3RF1-201ENST00000284637 CATSPERGQ6ZRH7 1159 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms