RNA–Protein interactions for RNA: ENST00000273482.10

TRPC1-201, Transcript of transient receptor potential cation channel subfamily C member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPC1, Length 4,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1-201ENST00000273482 AGO3Q9H9G7 860 aaKnown RBP17.1■□□□□ 0.33
TRPC1-201ENST00000273482 ARHGEF4Q9NR80 690 aa17.1■□□□□ 0.33
TRPC1-201ENST00000273482 USE1Q9NZ43 259 aa17.1■□□□□ 0.33
TRPC1-201ENST00000273482 CRLS1Q9UJA2 301 aa17.1■□□□□ 0.33
TRPC1-201ENST00000273482 RBMX2Q9Y388 322 aaKnown RBP17.1■□□□□ 0.33
TRPC1-201ENST00000273482 MEIS3P2A8K0S8 358 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 FAM20BO75063 409 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 MYO1DO94832 1006 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 SLC2A4P14672 509 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 GSSP48637 474 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 IRF9Q00978 393 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 TLE2Q04725 743 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 VARS2Q5ST30 1063 aaKnown RBP17.09■□□□□ 0.33
TRPC1-201ENST00000273482 SYPL2Q5VXT5 272 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 OLFML1Q6UWY5 402 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 UTS2BQ765I0 119 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 ITIH5Q86UX2 942 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 RIBC2Q9H4K1 309 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 CREBZFQ9NS37 354 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 RNF186Q9NXI6 227 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 FAM32AQ9Y421 112 aaKnown RBP17.09■□□□□ 0.33
TRPC1-201ENST00000273482 IGKV6-21A0A0C4DH24 114 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 PENKP01210 267 aaPredicted RBP17.09■□□□□ 0.33
TRPC1-201ENST00000273482 ZNF12P17014 697 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 CSTF3Q12996 717 aaKnown RBP17.09■□□□□ 0.33
TRPC1-201ENST00000273482 PCLAFQ15004 111 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 REP15Q6BDI9 236 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 HS6ST3Q8IZP7 471 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 OR8H2Q8N162 312 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 HOPXQ9BPY8 73 aaPredicted RBP17.09■□□□□ 0.33
TRPC1-201ENST00000273482 REXO4Q9GZR2 422 aaKnown RBP17.09■□□□□ 0.33
TRPC1-201ENST00000273482 PARVBQ9HBI1 364 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 ZC4H2Q9NQZ6 224 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 SMPD3Q9NY59 655 aaPredicted RBP17.09■□□□□ 0.33
TRPC1-201ENST00000273482 DGKBQ9Y6T7 804 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 ZSCAN9O15535 394 aaPredicted RBP17.09■□□□□ 0.33
TRPC1-201ENST00000273482 FGF3P11487 239 aaPredicted RBP17.09■□□□□ 0.33
TRPC1-201ENST00000273482 COL6A2P12110 1019 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 UBE3AQ05086 875 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 EPS8Q12929 822 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 ZNF846Q147U1 533 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 TBC1D21Q8IYX1 336 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 PSMA8Q8TAA3 256 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 RSPH1Q8WYR4 309 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 FAM50BQ9Y247 325 aa17.09■□□□□ 0.33
TRPC1-201ENST00000273482 MED26O95402 600 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 AP2A1O95782 977 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 EDN1P05305 212 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 GCAP28676 217 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 ETV4P43268 484 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 ENTPD1P49961 510 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 CLCN5P51795 746 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 VPS26BQ4G0F5 336 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 FUT10Q6P4F1 479 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 TMEM26Q6ZUK4 368 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 CAND1Q86VP6 1230 aaKnown RBP17.08■□□□□ 0.33
TRPC1-201ENST00000273482 SYTL1Q8IYJ3 562 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 PARP8Q8N3A8 854 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 SETD9Q8NE22 299 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 ZFP28Q8NHY6 868 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 ACBD6Q9BR61 282 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 CORO1BQ9BR76 489 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 TM6SF2Q9BZW4 377 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 WWOXQ9NZC7 414 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 FLRT1Q9NZU1 646 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 LEF1Q9UJU2 399 aaPredicted RBP17.08■□□□□ 0.33
TRPC1-201ENST00000273482 THSD7AQ9UPZ6 1657 aa17.08■□□□□ 0.33
TRPC1-201ENST00000273482 KATNA1O75449 491 aa17.08■□□□□ 0.32
TRPC1-201ENST00000273482 IPO13O94829 963 aaKnown RBP17.08■□□□□ 0.32
TRPC1-201ENST00000273482 NADKO95544 446 aaPredicted RBP17.08■□□□□ 0.32
TRPC1-201ENST00000273482 ZNF865P0CJ78 1059 aaPredicted RBP17.08■□□□□ 0.32
TRPC1-201ENST00000273482 SMAD3P84022 425 aaKnown RBP17.08■□□□□ 0.32
TRPC1-201ENST00000273482 CCDC142Q17RM4 750 aa17.08■□□□□ 0.32
TRPC1-201ENST00000273482 MYLK3Q32MK0 819 aa17.08■□□□□ 0.32
TRPC1-201ENST00000273482 CST9Q5W186 159 aa17.08■□□□□ 0.32
TRPC1-201ENST00000273482 PRSS55Q6UWB4 352 aaPredicted RBP17.08■□□□□ 0.32
TRPC1-201ENST00000273482 SVOPQ8N4V2 548 aa17.08■□□□□ 0.32
TRPC1-201ENST00000273482 HM13Q8TCT9 377 aa17.08■□□□□ 0.32
TRPC1-201ENST00000273482 ACOX2Q99424 681 aa17.08■□□□□ 0.32
TRPC1-201ENST00000273482 CACYBPQ9HB71 228 aaKnown RBP17.08■□□□□ 0.32
TRPC1-201ENST00000273482 VPS9D1Q9Y2B5 631 aa17.08■□□□□ 0.32
TRPC1-201ENST00000273482 Q9Y3F1 56 aa17.08■□□□□ 0.32
TRPC1-201ENST00000273482 A0A0U1RQF3 1178 aa17.08■□□□□ 0.32
TRPC1-201ENST00000273482 CNOT3O75175 753 aaKnown RBP17.08■□□□□ 0.32
TRPC1-201ENST00000273482 VPS4BO75351 444 aa17.08■□□□□ 0.32
TRPC1-201ENST00000273482 TIGD2Q4W5G0 525 aa17.08■□□□□ 0.32
TRPC1-201ENST00000273482 CANT1Q8WVQ1 401 aa17.08■□□□□ 0.32
TRPC1-201ENST00000273482 TAS2R13Q9NYV9 303 aa17.08■□□□□ 0.32
TRPC1-201ENST00000273482 C3orf18Q9UK00 162 aa17.08■□□□□ 0.32
TRPC1-201ENST00000273482 CAB39Q9Y376 341 aaPredicted RBP17.08■□□□□ 0.32
TRPC1-201ENST00000273482 AZIN1O14977 448 aa17.07■□□□□ 0.32
TRPC1-201ENST00000273482 DNAJA2O60884 412 aa17.07■□□□□ 0.32
TRPC1-201ENST00000273482 SLC7A1P30825 629 aa17.07■□□□□ 0.32
TRPC1-201ENST00000273482 TRAF3Q13114 568 aa17.07■□□□□ 0.32
TRPC1-201ENST00000273482 CLEC6AQ6EIG7 209 aa17.07■□□□□ 0.32
TRPC1-201ENST00000273482 DPY19L2P1Q6NXN4 242 aa17.07■□□□□ 0.32
TRPC1-201ENST00000273482 EPGNQ6UW88 154 aa17.07■□□□□ 0.32
TRPC1-201ENST00000273482 CACUL1Q86Y37 369 aa17.07■□□□□ 0.32
TRPC1-201ENST00000273482 POC5Q8NA72 575 aa17.07■□□□□ 0.32
TRPC1-201ENST00000273482 CENPNQ96H22 339 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms