RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 OPA3Q9H6K4 179 aa5.21□□□□□ -1.58
LINC00397-202ENST00000606785 SLC28A3Q9HAS3 691 aa5.21□□□□□ -1.58
LINC00397-202ENST00000606785 DDX4Q9NQI0 724 aaKnown RBP5.21□□□□□ -1.58
LINC00397-202ENST00000606785 AMACRQ9UHK6 382 aa5.21□□□□□ -1.58
LINC00397-202ENST00000606785 TLK1Q9UKI8 766 aa5.21□□□□□ -1.58
LINC00397-202ENST00000606785 PACSIN3Q9UKS6 424 aa5.21□□□□□ -1.58
LINC00397-202ENST00000606785 BTBD3Q9Y2F9 522 aa5.21□□□□□ -1.58
LINC00397-202ENST00000606785 POLR2AP24928 1970 aaKnown RBP5.21□□□□□ -1.58
LINC00397-202ENST00000606785 KIR2DS5A0A0G2JLQ3 304 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 PI4K2BG5E9Z4 385 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 KIR2DS3K7RE56 304 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 OGG1O15527 345 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 MTA2O94776 668 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 HIST1H2ABP04908 130 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 MYZAPP0CAP1 466 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 TFPIP10646 304 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 HIST1H2ADP20671 130 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 TUBA4AP68366 448 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 MRPS34P82930 218 aaKnown RBP5.2□□□□□ -1.58
LINC00397-202ENST00000606785 CXCL9Q07325 125 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 CAMK2DQ13557 499 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 NAE1Q13564 534 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 STIM1Q13586 685 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 CAPSQ13938 189 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 MYBPC2Q14324 1141 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 COLEC12Q5KU26 742 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 DAB2IPQ5VWQ8 1189 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 IGFL4Q6B9Z1 124 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 HIST2H2BCQ6DN03 193 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 HIST2H2BDQ6DRA6 164 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 DCLRE1AQ6PJP8 1040 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 HIST3H2AQ7L7L0 130 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 UBE2Q1Q7Z7E8 422 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 EPHX4Q8IUS5 362 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 ARID3BQ8IVW6 561 aaPredicted RBP5.2□□□□□ -1.58
LINC00397-202ENST00000606785 SCYL3Q8IZE3 742 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 HORMAD2Q8N7B1 307 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 C8orf58Q8NAV2 365 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 IGSF8Q969P0 613 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 PTERQ96BW5 349 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 ZNF333Q96JL9 665 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 CFAP57Q96MR6 1250 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 RAB3IPQ96QF0 476 aaPredicted RBP5.2□□□□□ -1.58
LINC00397-202ENST00000606785 SCNM1Q9BWG6 230 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 PAG1Q9NWQ8 432 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 GDE1Q9NZC3 331 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 RASAL2Q9UJF2 1139 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 OSGIN1Q9UJX0 560 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 ERVK-11Q9UQG0 969 aa5.2□□□□□ -1.58
LINC00397-202ENST00000606785 GPR75-ASB3A0A0A6YYF3 556 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 LNP1A1A4G5 178 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 C1orf226A1L170 272 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 AKR1B15C9JRZ8 316 aaPredicted RBP5.19□□□□□ -1.58
LINC00397-202ENST00000606785 NPIPB8E9PQR5 432 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 F8W810 466 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 ENO3P13929 434 aaPredicted RBP5.19□□□□□ -1.58
LINC00397-202ENST00000606785 DCTDP32321 178 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 TNFSF8P32971 234 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 CFHR1Q03591 330 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 DDR1Q08345 913 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 FAM27E3Q08E93 113 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 ZNF268Q14587 947 aaPredicted RBP5.19□□□□□ -1.58
LINC00397-202ENST00000606785 IL11RAQ14626 422 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 SLC9C1Q4G0N8 1177 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 MIDNQ504T8 468 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 KIAA1614Q5VZ46 1190 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 CST9LP1Q5W188 147 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 PLEKHA7Q6IQ23 1121 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 MFSD6Q6ZSS7 791 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 FAM43BQ6ZT52 329 aaPredicted RBP5.19□□□□□ -1.58
LINC00397-202ENST00000606785 ZNF627Q7L945 461 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 GUF1Q8N442 669 aaKnown RBP5.19□□□□□ -1.58
LINC00397-202ENST00000606785 TRPC4APQ8TEL6 797 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 SIPA1Q96FS4 1042 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 VCPIP1Q96JH7 1222 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 FER1L6-AS2Q96M78 137 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 CEP295NLQ96MC4 621 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 GBP5Q96PP8 586 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 DESI2Q9BSY9 194 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 LHPPQ9H008 270 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 XAB2Q9HCS7 855 aaKnown RBP5.19□□□□□ -1.58
LINC00397-202ENST00000606785 COPG2Q9UBF2 871 aa5.19□□□□□ -1.58
LINC00397-202ENST00000606785 ARPP21Q9UBL0 812 aaPredicted RBP5.19□□□□□ -1.58
LINC00397-202ENST00000606785 AGO2Q9UKV8 859 aaKnown RBP5.19□□□□□ -1.58
LINC00397-202ENST00000606785 ARHGEF40Q8TER5 1519 aa5.18□□□□□ -1.58
LINC00397-202ENST00000606785 TMEM202A6NGA9 273 aa5.18□□□□□ -1.58
LINC00397-202ENST00000606785 H3BQ06 376 aaPredicted RBP5.18□□□□□ -1.58
LINC00397-202ENST00000606785 MATN3O15232 486 aa5.18□□□□□ -1.58
LINC00397-202ENST00000606785 PRPF4O43172 522 aaKnown RBP eCLIP5.18□□□□□ -1.58
LINC00397-202ENST00000606785 ZC3H11AO75152 810 aaKnown RBP eCLIP5.18□□□□□ -1.58
LINC00397-202ENST00000606785 TGDSO95455 350 aa5.18□□□□□ -1.58
LINC00397-202ENST00000606785 CLDN7O95471 211 aa5.18□□□□□ -1.58
LINC00397-202ENST00000606785 C22orf31O95567 290 aa5.18□□□□□ -1.58
LINC00397-202ENST00000606785 PTAFRP25105 342 aa5.18□□□□□ -1.58
LINC00397-202ENST00000606785 CHATP28329 748 aa5.18□□□□□ -1.58
LINC00397-202ENST00000606785 GP5P40197 560 aa5.18□□□□□ -1.58
LINC00397-202ENST00000606785 PRCPP42785 496 aa5.18□□□□□ -1.58
LINC00397-202ENST00000606785 CCR3P51677 355 aa5.18□□□□□ -1.58
LINC00397-202ENST00000606785 GPR143P51810 404 aa5.18□□□□□ -1.58
LINC00397-202ENST00000606785 ECT2LQ008S8 904 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms