RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 NTAN1Q96AB6 310 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 NXNL1Q96CM4 212 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 PABPC5Q96DU9 382 aaKnown RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 CDRT15Q96T59 188 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 NDNQ99608 321 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 ORAI3Q9BRQ5 295 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 STN1Q9H668 368 aaKnown RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 SPATS2LQ9NUQ6 558 aaKnown RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 HIF3AQ9Y2N7 669 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 FAM95CA0A1B0GW59 222 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 DYTNA2CJ06 578 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 NEMP2A6NFY4 417 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 HDAC3O15379 428 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 GPC4O75487 556 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 PGK1P00558 417 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 THRAP10827 490 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 HNRNPLP14866 589 aaKnown RBP eCLIP5.39□□□□□ -1.55
VAPA-203ENST00000577539 TFEBP19484 476 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 PEX2P28328 305 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 DGKGP49619 791 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 RPL14P50914 215 aaKnown RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 CDK18Q07002 472 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 GPR162Q16538 588 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 LSM12Q3MHD2 195 aaKnown RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 FNDC3BQ53EP0 1204 aaKnown RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 NOMO2Q5JPE7 1267 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 LINC00523Q86TU6 105 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 LRRTM3Q86VH5 581 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 SPATA24Q86W54 205 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 TMEM86AQ8N2M4 240 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 FSTL5Q8N475 847 aaPredicted RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 SNRNP27Q8WVK2 155 aaKnown RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 NT5C3BQ969T7 300 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 FAM136AQ96C01 138 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 TIFAQ96CG3 184 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 RCN3Q96D15 328 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 HDAC11Q96DB2 347 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 VAT1Q99536 393 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 SERPINI1Q99574 410 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 TBL1YQ9BQ87 522 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 KATNAL1Q9BW62 490 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 TRPV6Q9H1D0 765 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 VCX3BQ9H321 246 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 RHOJQ9H4E5 214 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 EBF3Q9H4W6 596 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 CAAP1Q9H8G2 361 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 ADA2Q9NZK5 511 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 FLRT1Q9NZU1 646 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 SLC2A6Q9UGQ3 507 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 CDH9Q9ULB4 789 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 CDYLQ9Y232 598 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 AAR2Q9Y312 384 aaKnown RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 CCDC160A6NGH7 325 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 ARL5CA6NH57 179 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 TMEM233B4DJY2 109 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 G3V2L1 256 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 CCL22O00626 93 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 GABRDO14764 452 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 TNPO2O14787 897 aaKnown RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 ANXA9O76027 345 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 ABLIM3O94929 683 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 SLC4A1P02730 911 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 AHSGP02765 367 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 LYNP07948 512 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 OR4Q2P0C623 313 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 ODC1P11926 461 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 CD1EP15812 388 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 CALRP27797 417 aaKnown RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 LRPAP1P30533 357 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 THPOP40225 353 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 RPL34P49207 117 aaKnown RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 ARPP19P56211 112 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 TAS2R39P59534 338 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 MAXP61244 160 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 MRPS22P82650 360 aaKnown RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 MRPS6P82932 125 aaKnown RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 TSPY1Q01534 308 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 GALNT2Q10471 571 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 PRKAA1Q13131 559 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 SLC12A1Q13621 1099 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 CYLC2Q14093 348 aaPredicted RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 FLOT2Q14254 428 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 UGP2Q16851 508 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 ZBTB37Q5TC79 503 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 LIPMQ5VYY2 423 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 EP400NLQ6ZTU2 488 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 ARMCX6Q7L4S7 300 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 ANKRD23Q86SG2 305 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 ZC3HC1Q86WB0 502 aaKnown RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 KYQ8NBH2 561 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 OR6Y1Q8NGX8 325 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 LRGUKQ96M69 825 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 PPP1R10Q96QC0 940 aaKnown RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 GCNAQ96QF7 691 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 TMEM209Q96SK2 561 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 PTPN18Q99952 460 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 SARGQ9BW04 601 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 BRD8Q9H0E9 1235 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 C1orf21Q9H246 121 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 PIDD1Q9HB75 910 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms