RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ZNF484Q5JVG2 852 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 LY6G5CQ5SRR4 150 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 VITQ6UXI7 678 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 CYP26C1Q6V0L0 522 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 WDR5BQ86VZ2 330 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 IQCA1Q86XH1 822 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 ZNF843Q8N446 348 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 FSTL5Q8N475 847 aaPredicted RBP5.72□□□□□ -1.49
SF3B3-214ENST00000572365 DEFB119Q8N690 84 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 SCAMP5Q8TAC9 235 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 PROKR1Q8TCW9 393 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 URGCPQ8TCY9 931 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 Q96MF0 132 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 GAD1Q99259 594 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 CLSTN3Q9BQT9 956 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 SDF4Q9BRK5 362 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 PAAF1Q9BRP4 392 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 AIFM2Q9BRQ8 373 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 FAM167BQ9BTA0 163 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 MLST8Q9BVC4 326 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 HERC2P3Q9BVR0 1158 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 MAF1Q9H063 256 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 PLEKHA4Q9H4M7 779 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 TMEM9BQ9NQ34 198 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 VPS45Q9NRW7 570 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 HES2Q9Y543 173 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 PCDHB2Q9Y5E7 798 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 FRMPD4Q14CM0 1322 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 CACNA1DQ01668 2161 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 PTPN13Q12923 2485 aa5.71□□□□□ -1.49
SF3B3-214ENST00000572365 ANTXRLA6NF34 631 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 ZNF213O14771 459 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 LETM1O95202 739 aaPredicted RBP5.71□□□□□ -1.5
SF3B3-214ENST00000572365 FESP07332 822 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 FCARP24071 287 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 ITPKBP27987 946 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 FOLR3P41439 243 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 CCR2P41597 374 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 CLCN2P51788 898 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 ALFQ53S48 1182 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 ATPAF1Q5TC12 328 aaPredicted RBP5.71□□□□□ -1.5
SF3B3-214ENST00000572365 FNDC7Q5VTL7 733 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 MOGAT3Q86VF5 341 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 TTC30AQ86WT1 665 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 CCDC117Q8IWD4 279 aaPredicted RBP5.71□□□□□ -1.5
SF3B3-214ENST00000572365 FRMD1Q8N878 549 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 C11orf44Q8N8P7 122 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 WDR60Q8WVS4 1066 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 PIGKQ92643 395 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 RFKQ969G6 155 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 R3HDM4Q96D70 268 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 WDYHV1Q96HA8 205 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 FBXL20Q96IG2 436 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 PBKQ96KB5 322 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 MXRA8Q9BRK3 442 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 RIOX1Q9H6W3 641 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 ZBTB40Q9NUA8 1239 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 ZDHHC7Q9NXF8 308 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 GTSE1Q9NYZ3 720 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 EHD3Q9NZN3 535 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 KIF17Q9P2E2 1029 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 DKK3Q9UBP4 350 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 NKX1-2Q9UD57 310 aaPredicted RBP5.71□□□□□ -1.5
SF3B3-214ENST00000572365 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.71□□□□□ -1.5
SF3B3-214ENST00000572365 DAPP1Q9UN19 280 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 ZFP37Q9Y6Q3 630 aaPredicted RBP5.71□□□□□ -1.5
SF3B3-214ENST00000572365 MYOFQ9NZM1 2061 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 COL4A2P08572 1712 aa5.71□□□□□ -1.5
SF3B3-214ENST00000572365 PTPRDP23468 1912 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 BCLAF3A2AJT9 711 aaKnown RBP5.7□□□□□ -1.5
SF3B3-214ENST00000572365 FAM90A18PA6NE21 464 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 FAM90A16PA6NEW6 464 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 FAM90A9PA6NNJ1 464 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 A8MVJ9 347 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 FAM90A5PA8MXJ8 464 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 J3QKU1 62 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 PSMD9O00233 223 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 ZNF263O14978 683 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 PEX1O43933 1283 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 TADA2AO75478 443 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 ECI2O75521 394 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 WDR47O94967 919 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 NXPH3O95157 252 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 FAM90A15PP0C7V4 464 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 FAM90A14PP0C7W9 464 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 RXRAP19793 462 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 CSRP1P21291 193 aaKnown RBP5.7□□□□□ -1.5
SF3B3-214ENST00000572365 OR1D2P34982 312 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 DHPSP49366 369 aaPredicted RBP5.7□□□□□ -1.5
SF3B3-214ENST00000572365 ARPP19P56211 112 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 BMPR2Q13873 1038 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 EFR3AQ14156 821 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 CSHL1Q14406 222 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 USP41Q3LFD5 358 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 MCMDC2Q4G0Z9 681 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 LIN9Q5TKA1 542 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 FAM171A1Q5VUB5 890 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 RINT1Q6NUQ1 792 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 FUT10Q6P4F1 479 aa5.7□□□□□ -1.5
SF3B3-214ENST00000572365 RAB11FIP2Q7L804 512 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms