RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 SLC22A18ASQ8N1D0 253 aa13.01□□□□□ -0.33
CLK3-224ENST00000568605 DEFB124Q8NES8 71 aa13.01□□□□□ -0.33
CLK3-224ENST00000568605 CCHCR1Q8TD31 782 aa13.01□□□□□ -0.33
CLK3-224ENST00000568605 MAIP1Q8WWC4 291 aa13.01□□□□□ -0.33
CLK3-224ENST00000568605 DTD2Q96FN9 168 aa13.01□□□□□ -0.33
CLK3-224ENST00000568605 LYSMD1Q96S90 227 aa13.01□□□□□ -0.33
CLK3-224ENST00000568605 CDC6Q99741 560 aa13.01□□□□□ -0.33
CLK3-224ENST00000568605 HERPUD2Q9BSE4 406 aa13.01□□□□□ -0.33
CLK3-224ENST00000568605 MLPHQ9BV36 600 aaPredicted RBP13.01□□□□□ -0.33
CLK3-224ENST00000568605 FSD1LQ9BXM9 530 aa13.01□□□□□ -0.33
CLK3-224ENST00000568605 GBA3Q9H227 469 aa13.01□□□□□ -0.33
CLK3-224ENST00000568605 DNAJC28Q9NX36 388 aa13.01□□□□□ -0.33
CLK3-224ENST00000568605 GOLGA6AQ9NYA3 693 aa13.01□□□□□ -0.33
CLK3-224ENST00000568605 FAM153AQ9UHL3 310 aa13.01□□□□□ -0.33
CLK3-224ENST00000568605 SPTBN2O15020 2390 aa13□□□□□ -0.33
CLK3-224ENST00000568605 C1orf232A0A0U1RR37 186 aa13□□□□□ -0.33
CLK3-224ENST00000568605 PDE2AO00408 941 aaPredicted RBP13□□□□□ -0.33
CLK3-224ENST00000568605 NDST3O95803 873 aa13□□□□□ -0.33
CLK3-224ENST00000568605 HNF1BP35680 557 aa13□□□□□ -0.33
CLK3-224ENST00000568605 GEMP55040 296 aa13□□□□□ -0.33
CLK3-224ENST00000568605 NFATC4Q14934 902 aa13□□□□□ -0.33
CLK3-224ENST00000568605 WSCD2Q2TBF2 565 aa13□□□□□ -0.33
CLK3-224ENST00000568605 PIP4P1Q86T03 277 aa13□□□□□ -0.33
CLK3-224ENST00000568605 RHBDD1Q8TEB9 315 aa13□□□□□ -0.33
CLK3-224ENST00000568605 BTN2A2Q8WVV5 523 aa13□□□□□ -0.33
CLK3-224ENST00000568605 COQ10AQ96MF6 247 aa13□□□□□ -0.33
CLK3-224ENST00000568605 FCRL5Q96RD9 977 aa13□□□□□ -0.33
CLK3-224ENST00000568605 WDR26Q9H7D7 661 aa13□□□□□ -0.33
CLK3-224ENST00000568605 MBNL1Q9NR56 388 aaKnown RBP13□□□□□ -0.33
CLK3-224ENST00000568605 PKD2L2Q9NZM6 624 aa13□□□□□ -0.33
CLK3-224ENST00000568605 AAR2Q9Y312 384 aaKnown RBP13□□□□□ -0.33
CLK3-224ENST00000568605 NEMP2A6NFY4 417 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 SH3BP5O60239 455 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 PMPCBO75439 489 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 MT-CYBP00156 380 aaPredicted RBP12.99□□□□□ -0.33
CLK3-224ENST00000568605 ALPPL2P10696 532 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 NME1P15531 152 aaKnown RBP12.99□□□□□ -0.33
CLK3-224ENST00000568605 HLA-DPA1P20036 260 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 ACTN2P35609 894 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 KIAA1024LP59773 190 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 FOXK2Q01167 660 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 CCDC173Q0VFZ6 552 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 FZD2Q14332 565 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 INPP5AQ14642 412 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 QPCTQ16769 361 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 P3H1Q32P28 736 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 ANKRD20A2Q5SQ80 823 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 ANKRD20A1Q5TYW2 823 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 ANKRD20A3Q5VUR7 823 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 RAET1GQ6H3X3 334 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 DBX2Q6ZNG2 339 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 ARHGEF18Q6ZSZ5 1173 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 ZNF765Q7L2R6 523 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 TSPAN33Q86UF1 283 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 SLC13A5Q86YT5 568 aaPredicted RBP12.99□□□□□ -0.33
CLK3-224ENST00000568605 IPMKQ8NFU5 416 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 SPATA22Q8NHS9 363 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 SAP25Q8TEE9 199 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 TADA1Q96BN2 335 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 WDR92Q96MX6 357 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 SPATA13Q96N96 652 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 FAM118BQ9BPY3 351 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 APOOQ9BUR5 198 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 PHPT1Q9NRX4 125 aaPredicted RBP12.99□□□□□ -0.33
CLK3-224ENST00000568605 RAD18Q9NS91 495 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 EVA1BQ9NVM1 165 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 FTSJ1Q9UET6 329 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 PCOLCE2Q9UKZ9 415 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 ZKSCAN5Q9Y2L8 839 aa12.99□□□□□ -0.33
CLK3-224ENST00000568605 PIKFYVEQ9Y2I7 2098 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 DNAH14Q0VDD8 3507 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 KIF5CO60282 957 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 PIAS2O75928 621 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 RASGRP1O95267 797 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 PRLP01236 227 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 EPOP01588 193 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 FGF1P05230 155 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 MYCLP1P12525 358 aaPredicted RBP12.98□□□□□ -0.33
CLK3-224ENST00000568605 JUNDP17535 347 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 TEAD1P28347 426 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 CD68P34810 354 aaPredicted RBP12.98□□□□□ -0.33
CLK3-224ENST00000568605 ETV3P41162 512 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 STC1P52823 247 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 DPTQ07507 201 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 PRAMEF14Q5SWL7 426 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 CRTC1Q6UUV9 634 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 HSD11B1LQ7Z5J1 315 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 GATAD2AQ86YP4 633 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 NRSN1Q8IZ57 195 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 SLC35B2Q8TB61 432 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 AP2M1Q96CW1 435 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 TBATAQ96M53 351 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 TRIB3Q96RU7 358 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 SLC13A1Q9BZW2 595 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 CDH19Q9H159 772 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 KCNF1Q9H3M0 494 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 TRABDQ9H4I3 376 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 ZFYVE1Q9HBF4 777 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 MAGEE1Q9HCI5 957 aa12.98□□□□□ -0.33
CLK3-224ENST00000568605 UBP1Q9NZI7 540 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms