RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 C6orf132Q5T0Z8 1188 aa13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 KDM7AQ6ZMT4 941 aa13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 NLRP8Q86W28 1048 aa13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 GKN2Q86XP6 184 aa13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 PLA2G15Q8NCC3 412 aa13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 OR56A4Q8NGH8 313 aa13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 WDR48Q8TAF3 677 aa13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 ARRDC2Q8TBH0 407 aa13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 NAT6Q93015 286 aa13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 TSACCQ96A04 125 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 FUBP1Q96AE4 644 aaKnown RBP13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 NUS1Q96E22 293 aa13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 DTD2Q96FN9 168 aa13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 NRSN2Q9GZP1 204 aa13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 TCEAL2Q9H3H9 227 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 PHPT1Q9NRX4 125 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 PNMA8BQ9ULN7 279 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 TTLL3Q9Y4R7 772 aa13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 ALG6Q9Y672 507 aa13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 EPN1Q9Y6I3 576 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-205ENST00000553300 LY6G6EA0A0G2JKS1 128 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 A0A0J9YYE9 177 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 NPIPB15A6NHN6 443 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 SRRM3A6NNA2 597 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 OPA1O60313 960 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 ZRANB2O95218 330 aaKnown RBP eCLIP13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 MT-CO3P00414 261 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 JCHAINP01591 159 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 TRBC1P01850 177 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 HLA-DQB2P05538 268 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 PDHA1P08559 390 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 DSC2Q02487 901 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 DPTQ07507 201 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 C1orf61Q13536 156 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 RFX6Q8HWS3 928 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 DCBLD1Q8N8Z6 715 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 RNF25Q96BH1 459 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 GRAMD1AQ96CP6 724 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 NXPE2Q96DL1 559 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 RBM15Q96T37 977 aaKnown RBP eCLIP13.16□□□□□ -0.31e-17■■■■■ 48.5
HNRNPC-205ENST00000553300 LGMNQ99538 433 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 TDRD1Q9BXT4 1180 aaKnown RBP13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 ADGRE3Q9BY15 652 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 CLPBQ9H078 707 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 PCDH9Q9HC56 1237 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 U3KQA8 63 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 ASXL3Q9C0F0 2248 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 PKD1L2Q7Z442 2459 aa13.16□□□□□ -0.3
HNRNPC-205ENST00000553300 CELSR3Q9NYQ7 3312 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 ZFHX4Q86UP3 3567 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 TMEM202A6NGA9 273 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 KCNK1O00180 336 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 NDUFA10O95299 355 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 MYCLP1P12525 358 aaPredicted RBP13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 TNNT1P13805 278 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 FECHP22830 423 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 LHCGRP22888 699 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 ETV3P41162 512 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 CDKN2BP42772 138 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 AP1B1Q10567 949 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 TAZQ16635 292 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 DENND2CQ68D51 928 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 C11orf63Q6NUN7 778 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 ZNF765Q7L2R6 523 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 RD3Q7Z3Z2 195 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 TECPR1Q7Z6L1 1165 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 KATNAL2Q8IYT4 538 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 RCOR2Q8IZ40 523 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 OR6C4Q8NGE1 309 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 IFI44Q8TCB0 444 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 OLFM3Q96PB7 478 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 DEPDC7Q96QD5 511 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 LYSMD1Q96S90 227 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 TEX101Q9BY14 249 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 CHKBQ9Y259 395 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 URB1O60287 2271 aaKnown RBP13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 DSPP15924 2871 aaKnown RBP13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 CHD6Q8TD26 2715 aa13.15□□□□□ -0.3
HNRNPC-205ENST00000553300 MYLKQ15746 1914 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 CFAP47Q6ZTR5 3102 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 CPED1A4D0V7 1026 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 CAPN8A6NHC0 703 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 ANKRD66B4E2M5 251 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 MTSS1O43312 755 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 KRT37O76014 449 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 CTPS1P17812 591 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 TGM2P21980 687 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 PTSQ03393 145 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 CYP4F3Q08477 520 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 NIPAL4Q0D2K0 466 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 PEX6Q13608 980 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 RTP5Q14D33 572 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 SLC14A2Q15849 920 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 CDKN3Q16667 212 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 TFDP3Q5H9I0 405 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 CDCP2Q5VXM1 449 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 LRRC66Q68CR7 880 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 CRTC1Q6UUV9 634 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 MFSD7Q6UXD7 560 aa13.14□□□□□ -0.31
HNRNPC-205ENST00000553300 Q6ZVL8 140 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms