RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 APOBEC3BQ9UH17 382 aaKnown RBP11.84□□□□□ -0.51
RAB5C-204ENST00000547517 KLF15Q9UIH9 416 aa11.84□□□□□ -0.51
RAB5C-204ENST00000547517 SPEGQ15772 3267 aa11.84□□□□□ -0.51
RAB5C-204ENST00000547517 CABIN1Q9Y6J0 2220 aa11.84□□□□□ -0.51
RAB5C-204ENST00000547517 HACD1B0YJ81 288 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 K7ESM1 405 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 PSMD11O00231 422 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 TOR1BO14657 336 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 ENC1O14682 589 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 DDX3YO15523 660 aaKnown RBP11.83□□□□□ -0.52
RAB5C-204ENST00000547517 MTSS1O43312 755 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 HYAL3O43820 417 aaPredicted RBP11.83□□□□□ -0.52
RAB5C-204ENST00000547517 NRDCO43847 1150 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 TJP3O95049 919 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 LDOC1O95751 146 aaPredicted RBP11.83□□□□□ -0.52
RAB5C-204ENST00000547517 MT-CYBP00156 380 aaPredicted RBP11.83□□□□□ -0.52
RAB5C-204ENST00000547517 PRLP01236 227 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 SLC4A1P02730 911 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 C1SP09871 688 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 ATXN1LP0C7T5 689 aaKnown RBP11.83□□□□□ -0.52
RAB5C-204ENST00000547517 NFKB1P19838 968 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 HTR1BP28222 390 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 CD68P34810 354 aaPredicted RBP11.83□□□□□ -0.52
RAB5C-204ENST00000547517 RPL26P61254 145 aaKnown RBP11.83□□□□□ -0.52
RAB5C-204ENST00000547517 DNAJC3Q13217 504 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 TCEA2Q15560 299 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 QPCTQ16769 361 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 HS1BP3Q53T59 392 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 ESRP1Q6NXG1 681 aaKnown RBP11.83□□□□□ -0.52
RAB5C-204ENST00000547517 CRTC1Q6UUV9 634 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 ENPP7Q6UWV6 458 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 NYAP1Q6ZVC0 841 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 Q6ZVL8 140 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 SLCO6A1Q86UG4 719 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 CDKL3Q8IVW4 592 aaPredicted RBP11.83□□□□□ -0.52
RAB5C-204ENST00000547517 SLC25A45Q8N413 288 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 RNF10Q8N5U6 811 aaKnown RBP11.83□□□□□ -0.52
RAB5C-204ENST00000547517 LMX1AQ8TE12 382 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 HTR3CQ8WXA8 447 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 TEKT5Q96M29 485 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 ADGRE3Q9BY15 652 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 TCEAL2Q9H3H9 227 aaPredicted RBP11.83□□□□□ -0.52
RAB5C-204ENST00000547517 WDR26Q9H7D7 661 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 LZTFL1Q9NQ48 299 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 TOR4AQ9NXH8 423 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 UBP1Q9NZI7 540 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 KLQ9UEF7 1012 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 CD84Q9UIB8 345 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 ANGPTL2Q9UKU9 493 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 DNPEPQ9ULA0 475 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 PNMA8BQ9ULN7 279 aaPredicted RBP11.83□□□□□ -0.52
RAB5C-204ENST00000547517 RPL26L1Q9UNX3 145 aaKnown RBP11.83□□□□□ -0.52
RAB5C-204ENST00000547517 APOBEC2Q9Y235 224 aaKnown RBP11.83□□□□□ -0.52
RAB5C-204ENST00000547517 EFR3BQ9Y2G0 817 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 PPIL1Q9Y3C6 166 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 BAHCC1Q9P281 2608 aa11.83□□□□□ -0.52
RAB5C-204ENST00000547517 C1orf232A0A0U1RR37 186 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 CACNB4O00305 520 aaPredicted RBP11.82□□□□□ -0.52
RAB5C-204ENST00000547517 TRIM38O00635 465 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 SCAMP1O15126 338 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 SIGLEC6O43699 453 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 PMPCBO75439 489 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 ALPPL2P10696 532 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 ZNF30P17039 623 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 RBL1P28749 1068 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 STC1P52823 247 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 KIAA1024LP59773 190 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 EIF3EP60228 445 aaKnown RBP11.82□□□□□ -0.52
RAB5C-204ENST00000547517 PPARDQ03181 441 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 XRCC4Q13426 336 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 ALG11Q2TAA5 492 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 PRRT3Q5FWE3 981 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 FAXCQ5TGI0 409 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 RAET1GQ6H3X3 334 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 PNCKQ6P2M8 343 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 RFLNAQ6ZTI6 216 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 PID1Q7Z2X4 250 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 RD3Q7Z3Z2 195 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 HEATR4Q86WZ0 1026 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 HID1Q8IV36 788 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 ZNF567Q8N184 647 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 CHCHD4Q8N4Q1 142 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 OR4C6Q8NH72 309 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 ATL2Q8NHH9 583 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 BTN2A2Q8WVV5 523 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 TSACCQ96A04 125 aaPredicted RBP11.82□□□□□ -0.52
RAB5C-204ENST00000547517 FUBP1Q96AE4 644 aaKnown RBP11.82□□□□□ -0.52
RAB5C-204ENST00000547517 PDXPQ96GD0 296 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 HES6Q96HZ4 224 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 WDR92Q96MX6 357 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 ALS2CR12Q96Q35 445 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 TRIB3Q96RU7 358 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 VAT1Q99536 393 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 MLPHQ9BV36 600 aaPredicted RBP11.82□□□□□ -0.52
RAB5C-204ENST00000547517 LRRC61Q9BV99 259 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 SLC13A1Q9BZW2 595 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 SPASTQ9UBP0 616 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 RSPH14Q9UHP6 348 aa11.82□□□□□ -0.52
RAB5C-204ENST00000547517 PCNX2A6NKB5 2137 aa11.81□□□□□ -0.52
RAB5C-204ENST00000547517 GOLGA6L9A6NEM1 432 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms