RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 HPCAP84074 193 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 CCZ1BP86790 482 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 CCZ1P86791 482 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 PLOD1Q02809 727 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 RELQ04864 619 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 AP1B1Q10567 949 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 CBFBQ13951 182 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 PRKG1Q13976 671 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 GNA13Q14344 377 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 NCAPD2Q15021 1401 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 TOMM20Q15388 145 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 MAPKAPK3Q16644 382 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 GSTA3Q16772 222 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 PFKFB3Q16875 520 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 ODF2Q5BJF6 829 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 RNASE12Q5GAN4 147 aaKnown RBP4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 ZNF658Q5TYW1 1059 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 KLHDC7AQ5VTJ3 777 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 DAB2IPQ5VWQ8 1189 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 WDR93Q6P2C0 686 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 ZNF530Q6P9A1 599 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 CRTC1Q6UUV9 634 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 ABRAXAS1Q6UWZ7 409 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 CYP26C1Q6V0L0 522 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 ZNF813Q6ZN06 617 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 CATSPER4Q7RTX7 472 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 FAM228AQ86W67 206 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 SRRM1Q8IYB3 904 aaKnown RBP4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 ANKRD44Q8N8A2 993 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 LSMEM1Q8N8F7 131 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 ENAHQ8N8S7 591 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 DDHD1Q8NEL9 900 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 SUN3Q8TAQ9 357 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 STARD8Q92502 1023 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 AZIN2Q96A70 460 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 CTHRC1Q96CG8 243 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 NSMCE3Q96MG7 304 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 FNBP1Q96RU3 617 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 COQ7Q99807 217 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 ADGRE3Q9BY15 652 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 CLSTN2Q9H4D0 955 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 KAT14Q9H8E8 782 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 SCPEP1Q9HB40 452 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 TRPC7Q9HCX4 862 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 UBN1Q9NPG3 1134 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 C8orf4Q9NR00 106 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 FAIMQ9NVQ4 179 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 GID8Q9NWU2 228 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 ZNF69Q9UC07 566 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 VPS51Q9UID3 782 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 CHMP2BQ9UQN3 213 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 TMEM5Q9Y2B1 443 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 MAN2B2Q9Y2E5 1009 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 SLIT3O75094 1523 aa4.76□□□□□ -1.65
HMGB3P13-201ENST00000511263 GRIN2DO15399 1336 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 PDS5AQ29RF7 1337 aaKnown RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 SYNJ2BP-COX16A0A087WUM0 186 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 A0A0J9YVX5 310 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 LOC105371267A0A1B0GV96 52 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 A0A1B0GVG6 124 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 KANSL1LA0AUZ9 987 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 WDR91A4D1P6 747 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 OR6C65A6NJZ3 312 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 CENPBD1B2RD01 187 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 XPO1O14980 1071 aaKnown RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 SPRY2O43597 315 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 KLHL41O60662 606 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 PDE5AO76074 875 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 FAM107AO95990 144 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 ITGA2BP08514 1039 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 SCG2P13521 617 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 PRLRP16471 622 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 EGR1P18146 543 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 ATP6V1C1P21283 382 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 SP100P23497 879 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 CFL1P23528 166 aaKnown RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 FPR3P25089 353 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 EEF1GP26641 437 aaKnown RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 RPL9P32969 192 aaKnown RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 HTR3AP46098 478 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 GSTM5P46439 218 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 ASMTP46597 345 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 POLD2P49005 469 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 PCYT1AP49585 367 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 PROK1P58294 105 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 BPIFB3P59826 476 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 SSTP61278 116 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 ELF3P78545 371 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 GALNT1Q10472 559 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 DCTN2Q13561 401 aaKnown RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 ATP1A4Q13733 1029 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 ITGA9Q13797 1035 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 CSHL1Q14406 222 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 KPNB1Q14974 876 aaKnown RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 LARS2Q15031 903 aaKnown RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 ACOX1Q15067 660 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 P3H1Q32P28 736 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms