RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 ACTR3P61158 418 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 ACVR1Q04771 509 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 SULT2A1Q06520 285 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 HECTD3Q5T447 861 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 NET1Q7Z628 596 aaPredicted RBP15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 DEFB107AQ8IZN7 70 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 ARHGAP24Q8N264 748 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 TTC16Q8NEE8 873 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 CALML6Q8TD86 181 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 STMN2Q93045 179 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 ZNF385DQ9H6B1 395 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 AGO1Q9UL18 857 aaKnown RBP15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 PPM1HQ9ULR3 514 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 VWA7Q9Y334 891 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 YIPF1Q9Y548 306 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 PLXNA4Q9HCM2 1894 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 CBX4O00257 560 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 SNAP91O60641 907 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 ATP6V1G1O75348 118 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 FGF1P05230 155 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 LTA4HP09960 611 aaKnown RBP15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 ATP5F1P24539 256 aaPredicted RBP15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 PIK3R1P27986 724 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 CDKN1CP49918 316 aaPredicted RBP15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 SMARCB1Q12824 385 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 SLC14A2Q15849 920 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 CCDC6Q16204 474 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 TRIM60Q495X7 471 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 TCHHL1Q5QJ38 904 aaPredicted RBP15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 NXNQ6DKJ4 435 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 ALG1LQ6GMV1 187 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 KIAA1841Q6NSI8 718 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 SNX32Q86XE0 403 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 KBTBD2Q8IY47 623 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 ZNF784Q8NCA9 323 aaPredicted RBP15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 BHMTQ93088 406 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 PAK6Q9NQU5 681 aaPredicted RBP15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 UBA2Q9UBT2 640 aaPredicted RBP15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 CD3EAPO15446 510 aaKnown RBP15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 GPR39O43194 453 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 GNRH1P01148 92 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 PRLP01236 227 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 SERPINF2P08697 491 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 HLA-DPA1P20036 260 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 VHLP40337 213 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 SLC11A2P49281 568 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 CDH4P55283 916 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 OXCT1P55809 520 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 ZXDBP98169 803 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 FAM83EQ2M2I3 478 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 FSCBQ5H9T9 825 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 CXorf57Q6NSI4 855 aaKnown RBP15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 HPS6Q86YV9 775 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 MDGA1Q8NFP4 955 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 CCDC28BQ9BUN5 200 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 CINPQ9BW66 212 aaPredicted RBP15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 POLR3BQ9NW08 1133 aaPredicted RBP15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 COMMD8Q9NX08 183 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 CDH22Q9UJ99 828 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 PCDHGC4Q9Y5F7 938 aa15.2■□□□□ 0.02
SCAMP4-202ENST00000409472 LRRC14BA6NHZ5 514 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 H3BMM5 538 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 UBFD1O14562 309 aaKnown RBP15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 CD160O95971 181 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 HDCP19113 662 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 KPNA1P52294 538 aaPredicted RBP15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 C1QTNF8P60827 252 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 ARF5P84085 180 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 TMEM150AQ86TG1 271 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 SNX31Q8N9S9 440 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 ZNF333Q96JL9 665 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 PSKH2Q96QS6 385 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 MAGEH1Q9H213 219 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 NCKIPSDQ9NZQ3 722 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 STX18Q9P2W9 335 aaKnown RBP15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 CIDEBQ9UHD4 219 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 CDYLQ9Y232 598 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 FNDC3AQ9Y2H6 1198 aaKnown RBP15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 SDHDO14521 159 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 RPP40O75818 363 aaKnown RBP15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 CIB2O75838 187 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 IPO13O94829 963 aaKnown RBP15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 MT-CO1P00395 513 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 RHOCP08134 193 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 CR2P20023 1033 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 FDXRP22570 491 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 DNAJB1P25685 340 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 ZNF140P52738 457 aaPredicted RBP15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 PRKAA2P54646 552 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 TLE2Q04725 743 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 SLC34A1Q06495 639 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 CYTH1Q15438 398 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 PPP1R3AQ16821 1122 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 TRMT5Q32P41 509 aaKnown RBP15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 FOXB2Q5VYV0 432 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 LRRC74BQ6ZQY2 392 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 ISCA2Q86U28 154 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 REM2Q8IYK8 340 aaPredicted RBP15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 RYBPQ8N488 228 aaPredicted RBP15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 HIPK4Q8NE63 616 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms