RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 RBPJLQ9UBG7 517 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 SNX6Q9UNH7 406 aa17.24■□□□□ 0.35
GABRB3-202ENST00000311550 PDZK1P1A8MUH7 402 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 SNAP91O60641 907 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 KRT20P35900 424 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 AP5B1Q2VPB7 878 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 LIN52Q52LA3 116 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 TXNDC11Q6PKC3 985 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 UBR7Q8N806 425 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 PLEKHG4BQ96PX9 1271 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 TSPAN18Q96SJ8 248 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 SPG21Q9NZD8 308 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 FBXW11Q9UKB1 542 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 RPP40O75818 363 aaKnown RBP17.23■□□□□ 0.35
GABRB3-202ENST00000311550 TOP3BO95985 862 aaKnown RBP17.23■□□□□ 0.35
GABRB3-202ENST00000311550 AMHP03971 560 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 NCF4Q15080 339 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 TMEM198Q66K66 360 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 TRAPPC5Q8IUR0 188 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 SFRP1Q8N474 314 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 DGCR14Q96DF8 476 aaKnown RBP17.23■□□□□ 0.35
GABRB3-202ENST00000311550 BTN2A3PQ96KV6 586 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 HBEGFQ99075 208 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 RHOBTB2Q9BYZ6 727 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.23■□□□□ 0.35
GABRB3-202ENST00000311550 ST13P50502 369 aaKnown RBP17.23■□□□□ 0.35
GABRB3-202ENST00000311550 PITRM1Q5JRX3 1037 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 U3KQV3 271 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 LOC100506127A0A0U1RQW1 187 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 GRK3P35626 688 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 ANXA11P50995 505 aaKnown RBP17.23■□□□□ 0.35
GABRB3-202ENST00000311550 OLIG2Q13516 323 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 DGUOKQ16854 277 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 TAS1R3Q7RTX0 852 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 MTIF3Q9H2K0 278 aaKnown RBP17.23■□□□□ 0.35
GABRB3-202ENST00000311550 IGSF9Q9P2J2 1179 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 IFRD1O00458 451 aaPredicted RBP17.23■□□□□ 0.35
GABRB3-202ENST00000311550 REP15Q6BDI9 236 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 PAOXQ6QHF9 649 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 TRIM48Q8IWZ4 208 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 TEKT5Q96M29 485 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 GPR21Q99679 349 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 CACNA2D2Q9NY47 1150 aa17.23■□□□□ 0.35
GABRB3-202ENST00000311550 NEMP2A6NFY4 417 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 MATN3O15232 486 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 IGDCC3Q8IVU1 814 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 PHF21AQ96BD5 680 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 OR52E6Q96RD3 313 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 TMEM106CQ9BVX2 250 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 KLHL20Q9Y2M5 609 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 MYH6P13533 1939 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 ZNF37AP17032 561 aaPredicted RBP17.22■□□□□ 0.35
GABRB3-202ENST00000311550 HPCAL1P37235 193 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 EIF2B2P49770 351 aaKnown RBP17.22■□□□□ 0.35
GABRB3-202ENST00000311550 CCL23P55773 120 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 C1orf220Q5T0J3 134 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 ZNF605Q86T29 641 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 GPR156Q8NFN8 814 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 HMCESQ96FZ2 354 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 SLC7A5P2Q9GIP4 190 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 C3orf18Q9UK00 162 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 TEX264Q9Y6I9 313 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 SNTNA6NMZ2 147 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 KPNA4O00629 521 aaPredicted RBP17.22■□□□□ 0.35
GABRB3-202ENST00000311550 ALOX12P18054 663 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 POLD2P49005 469 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 C1DQ13901 141 aaKnown RBP17.22■□□□□ 0.35
GABRB3-202ENST00000311550 SDE2Q6IQ49 451 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 LRTOMTQ8WZ04 291 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 HOPXQ9BPY8 73 aaPredicted RBP17.22■□□□□ 0.35
GABRB3-202ENST00000311550 EIF2B3Q9NR50 452 aaKnown RBP17.22■□□□□ 0.35
GABRB3-202ENST00000311550 ETAA1Q9NY74 926 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 TBC1D30Q9Y2I9 924 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 ARL5CA6NH57 179 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 CPSF7Q8N684 471 aaKnown RBP17.22■□□□□ 0.35
GABRB3-202ENST00000311550 PLK2Q9NYY3 685 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 AHSPQ9NZD4 102 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 MFHAS1Q9Y4C4 1052 aa17.22■□□□□ 0.35
GABRB3-202ENST00000311550 ADCY6O43306 1168 aa17.21■□□□□ 0.35
GABRB3-202ENST00000311550 TTKP33981 857 aa17.21■□□□□ 0.35
GABRB3-202ENST00000311550 POLR2LP62875 67 aaKnown RBP17.21■□□□□ 0.35
GABRB3-202ENST00000311550 CASP12Q6UXS9 341 aa17.21■□□□□ 0.35
GABRB3-202ENST00000311550 CNTD1Q8N815 330 aa17.21■□□□□ 0.35
GABRB3-202ENST00000311550 OR2T34Q8NGX1 318 aa17.21■□□□□ 0.35
GABRB3-202ENST00000311550 OR2T3Q8NH03 318 aa17.21■□□□□ 0.35
GABRB3-202ENST00000311550 SCAMP5Q8TAC9 235 aa17.21■□□□□ 0.35
GABRB3-202ENST00000311550 REXO4Q9GZR2 422 aaKnown RBP17.21■□□□□ 0.35
GABRB3-202ENST00000311550 ATP13A3Q9H7F0 1226 aa17.21■□□□□ 0.35
GABRB3-202ENST00000311550 GMPPBQ9Y5P6 360 aa17.21■□□□□ 0.35
GABRB3-202ENST00000311550 TRIM24O15164 1050 aa17.21■□□□□ 0.35
GABRB3-202ENST00000311550 CATP04040 527 aaKnown RBP17.21■□□□□ 0.35
GABRB3-202ENST00000311550 CYP2A6P11509 494 aaPredicted RBP17.21■□□□□ 0.35
GABRB3-202ENST00000311550 PPP2R1BP30154 601 aa17.21■□□□□ 0.35
GABRB3-202ENST00000311550 SLC1A2P43004 574 aa17.21■□□□□ 0.35
GABRB3-202ENST00000311550 FAM110CQ1W6H9 321 aa17.21■□□□□ 0.35
GABRB3-202ENST00000311550 SETMARQ53H47 684 aaPredicted RBP17.21■□□□□ 0.35
GABRB3-202ENST00000311550 ARMCX4Q5H9R4 360 aa17.21■□□□□ 0.35
GABRB3-202ENST00000311550 WDR60Q8WVS4 1066 aa17.21■□□□□ 0.35
GABRB3-202ENST00000311550 BTN2A2Q8WVV5 523 aa17.21■□□□□ 0.35
GABRB3-202ENST00000311550 DNAJC1Q96KC8 554 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms