RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 ARL8AQ96BM9 186 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 PAFAH2Q99487 392 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 NLE1Q9NVX2 485 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 NUMA1Q14980 2115 aa14.77□□□□□ -0.04
SHKBP1-211ENST00000595945 PIKFYVEQ9Y2I7 2098 aa14.77□□□□□ -0.04
SHKBP1-211ENST00000595945 TRPM6Q9BX84 2022 aa14.77□□□□□ -0.04
SHKBP1-211ENST00000595945 C2orf81A6NN90 581 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 C16orf96A6NNT2 1141 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 UPK3BL1B0FP48 263 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 UPK3BL2E5RIL1 263 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 H3BQF6 201 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 MAN2B1O00754 1011 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 ADAM23O75077 832 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 CDH16O75309 829 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 RPP40O75818 363 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 PIAS1O75925 651 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 ERVK-10P10266 1014 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 LPOP22079 712 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 ITGB7P26010 798 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 NTSR1P30989 418 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 WASP42768 502 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 ARSDP51689 593 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 POLR2LP62875 67 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 MRPS21P82921 87 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 PDE1BQ01064 536 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 CCINQ13939 588 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 UGP2Q16851 508 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 SKIDA1Q1XH10 827 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 FBXO43Q4G163 708 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 TEDDM1Q5T9Z0 273 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 AGBL2Q5U5Z8 902 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 ADGRD1Q6QNK2 874 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 CRTC1Q6UUV9 634 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 PARS2Q7L3T8 475 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 DSG4Q86SJ6 1040 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 KCNMB4Q86W47 210 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 LRRC6Q86X45 466 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 CNTN4Q8IWV2 1026 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 CHPFQ8IZ52 775 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 NDUFAF2Q8N183 169 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 ZNF687Q8N1G0 1237 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 RIBC1Q8N443 379 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 OR13C4Q8NGS5 318 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 ZBTB9Q96C00 473 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 EID2BQ96D98 161 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 PGM2Q96G03 612 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 DNAJC1Q96KC8 554 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 RSPH9Q9H1X1 276 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 MFSD1Q9H3U5 465 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 CD248Q9HCU0 757 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 MED4Q9NPJ6 270 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 C20orf96Q9NUD7 363 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 IL17CQ9P0M4 197 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 GGT7Q9UJ14 662 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 SORCS3Q9UPU3 1222 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 DOCK9Q9BZ29 2069 aa14.77□□□□□ -0.05
SHKBP1-211ENST00000595945 A0A0U1RQS6 177 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 NPIPB15A6NHN6 443 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 POC1B-GALNT4F8VUJ3 575 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 SLC7A4O43246 635 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 BUD23O43709 281 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 UGT1A9O60656 530 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 VAPBO95292 243 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 KLF8O95600 359 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 MYZAPP0CAP1 466 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 PAMP19021 973 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 HMGCLP35914 325 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 SLCO1A2P46721 670 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 PRKCQQ04759 706 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 PTPRCAPQ14761 206 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 C2orf27AQ580R0 203 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 TTMPQ5BVD1 217 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 USP45Q70EL2 814 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 DPPA4Q7L190 304 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 LYSMD3Q7Z3D4 306 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 TRMT11Q7Z4G4 463 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 SLC26A11Q86WA9 606 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 RASSF3Q86WH2 238 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 PPM1NQ8N819 430 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 CDKL2Q92772 493 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 CDKN2AIPNLQ96HQ2 116 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 UGT1A7Q9HAW7 530 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 UGT1A10Q9HAW8 530 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 UGT1A8Q9HAW9 530 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 POLR3BQ9NW08 1133 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 IL1RAPL1Q9NZN1 696 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 SLC17A6Q9P2U8 582 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 PSMC3IPQ9P2W1 217 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 CTNNAL1Q9UBT7 734 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 B4GALT6Q9UBX8 382 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 ZNF180Q9UJW8 692 aa14.76□□□□□ -0.05
SHKBP1-211ENST00000595945 TLDC2A0PJX2 215 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 GOLGA8KD6RF30 607 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 C1QTNF3-AMACRE9PGA6 284 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 H7C0S8 307 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 KPNA3O00505 521 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 SPINT1O43278 529 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 CYP2A6P11509 494 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 LHCGRP22888 699 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 VIPR1P32241 457 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms