RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 CD38P28907 300 aa6.5□□□□□ -1.37
LEMD3-206ENST00000545026 KRT20P35900 424 aa6.5□□□□□ -1.37
LEMD3-206ENST00000545026 SORDQ00796 357 aa6.5□□□□□ -1.37
LEMD3-206ENST00000545026 NAE1Q13564 534 aa6.5□□□□□ -1.37
LEMD3-206ENST00000545026 EZH2Q15910 746 aaKnown RBP6.5□□□□□ -1.37
LEMD3-206ENST00000545026 CDONQ4KMG0 1287 aa6.5□□□□□ -1.37
LEMD3-206ENST00000545026 WASHC2DQ5SRD0 308 aa6.5□□□□□ -1.37
LEMD3-206ENST00000545026 MFSD4BQ5TF39 518 aa6.5□□□□□ -1.37
LEMD3-206ENST00000545026 SRRM1Q8IYB3 904 aaKnown RBP6.5□□□□□ -1.37
LEMD3-206ENST00000545026 CCDC13Q8IYE1 715 aa6.5□□□□□ -1.37
LEMD3-206ENST00000545026 MMP21Q8N119 569 aa6.5□□□□□ -1.37
LEMD3-206ENST00000545026 ARFGAP1Q8N6T3 406 aa6.5□□□□□ -1.37
LEMD3-206ENST00000545026 C1orf131Q8NDD1 294 aaKnown RBP6.5□□□□□ -1.37
LEMD3-206ENST00000545026 ELMOD3Q96FG2 381 aa6.5□□□□□ -1.37
LEMD3-206ENST00000545026 ZNF570Q96NI8 536 aa6.5□□□□□ -1.37
LEMD3-206ENST00000545026 OR2A14Q96R47 310 aa6.5□□□□□ -1.37
LEMD3-206ENST00000545026 GFM1Q96RP9 751 aaKnown RBP6.5□□□□□ -1.37
LEMD3-206ENST00000545026 TMEM47Q9BQJ4 181 aa6.5□□□□□ -1.37
LEMD3-206ENST00000545026 SETD4Q9NVD3 440 aa6.5□□□□□ -1.37
LEMD3-206ENST00000545026 CISD1Q9NZ45 108 aaKnown RBP6.5□□□□□ -1.37
LEMD3-206ENST00000545026 PTGFRNQ9P2B2 879 aa6.5□□□□□ -1.37
LEMD3-206ENST00000545026 C11orf21Q9P2W6 132 aa6.5□□□□□ -1.37
LEMD3-206ENST00000545026 HS3ST3B1Q9Y662 390 aa6.5□□□□□ -1.37
LEMD3-206ENST00000545026 P4HA2O15460 535 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 ZC3H11AO75152 810 aaKnown RBP eCLIP6.49□□□□□ -1.37
LEMD3-206ENST00000545026 FGBP02675 491 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 NR2F1P10589 423 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 PRF1P14222 555 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 HOXA13P31271 388 aaPredicted RBP6.49□□□□□ -1.37
LEMD3-206ENST00000545026 THPOP40225 353 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 EIF2DP41214 584 aaKnown RBP6.49□□□□□ -1.37
LEMD3-206ENST00000545026 GALCP54803 685 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 P2RX3P56373 397 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 ADIPOQQ15848 244 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 SMN1Q16637 294 aaKnown RBP6.49□□□□□ -1.37
LEMD3-206ENST00000545026 DCAF6Q58WW2 860 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 MANEAQ5SRI9 462 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 LCE5AQ5TCM9 118 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 PMS2CLQ68D20 193 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 ANKRD54Q6NXT1 300 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 CFAP77Q6ZQR2 320 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 SEPT14Q6ZU15 432 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 MTSS1LQ765P7 747 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 TRAPPC11Q7Z392 1133 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 TEX11Q8IYF3 940 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 OR14L1PQ8NHC6 308 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 IGSF8Q969P0 613 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 ERGIC1Q969X5 290 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 NCAPGQ9BPX3 1015 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 SRSF8Q9BRL6 282 aaKnown RBP6.49□□□□□ -1.37
LEMD3-206ENST00000545026 ISCUQ9H1K1 167 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 NENFQ9UMX5 172 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 ZNF804BA4D1E1 1349 aa6.49□□□□□ -1.37
LEMD3-206ENST00000545026 TMEM202A6NGA9 273 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 I6L893 689 aaPredicted RBP6.48□□□□□ -1.37
LEMD3-206ENST00000545026 ENTPD3O75355 529 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 NDUFB4O95168 129 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 TUBBP07437 444 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 SELLP14151 372 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 TNFRSF1BP20333 461 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 PIK3CAP42336 1068 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 ME1P48163 572 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 COMPP49747 757 aaPredicted RBP6.48□□□□□ -1.37
LEMD3-206ENST00000545026 CAMPP49913 170 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 ADORA2A-AS1P86434 159 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 ZNF284Q2VY69 593 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 ZSCAN23Q3MJ62 389 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 DCAF12L2Q5VW00 463 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 SYCE2Q6PIF2 218 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 TMCO3Q6UWJ1 677 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 KRBA2Q6ZNG9 492 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 RNF168Q8IYW5 571 aaPredicted RBP6.48□□□□□ -1.37
LEMD3-206ENST00000545026 SCML4Q8N228 414 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 NANOGP1Q8N7R0 232 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 HJURPQ8NCD3 748 aaPredicted RBP6.48□□□□□ -1.37
LEMD3-206ENST00000545026 ZNF548Q8NEK5 533 aaPredicted RBP6.48□□□□□ -1.37
LEMD3-206ENST00000545026 ARRDC2Q8TBH0 407 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 JAKMIP2Q96AA8 810 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 APOLD1Q96LR9 279 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 SEPT5Q99719 369 aaPredicted RBP6.48□□□□□ -1.37
LEMD3-206ENST00000545026 SLF1Q9BQI6 1058 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 PDE7BQ9NP56 450 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 MKKSQ9NPJ1 570 aaPredicted RBP6.48□□□□□ -1.37
LEMD3-206ENST00000545026 OGFRQ9NZT2 677 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 ERVK-11Q9UQG0 969 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 STON1Q9Y6Q2 735 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 MAU2Q9Y6X3 613 aa6.48□□□□□ -1.37
LEMD3-206ENST00000545026 HS6ST1O60243 411 aa6.47□□□□□ -1.37
LEMD3-206ENST00000545026 FTCDO95954 541 aa6.47□□□□□ -1.37
LEMD3-206ENST00000545026 ARSBP15848 533 aa6.47□□□□□ -1.37
LEMD3-206ENST00000545026 TMEM11P17152 192 aa6.47□□□□□ -1.37
LEMD3-206ENST00000545026 IL11P20809 199 aa6.47□□□□□ -1.37
LEMD3-206ENST00000545026 NNMTP40261 264 aa6.47□□□□□ -1.37
LEMD3-206ENST00000545026 MMP13P45452 471 aa6.47□□□□□ -1.37
LEMD3-206ENST00000545026 MRPL12P52815 198 aaKnown RBP6.47□□□□□ -1.37
LEMD3-206ENST00000545026 PMS2P54278 862 aa6.47□□□□□ -1.37
LEMD3-206ENST00000545026 ST3GAL1Q11201 340 aa6.47□□□□□ -1.37
LEMD3-206ENST00000545026 IKQ13123 557 aaPredicted RBP6.47□□□□□ -1.37
LEMD3-206ENST00000545026 PTGR1Q14914 329 aa6.47□□□□□ -1.37
LEMD3-206ENST00000545026 NAB2Q15742 525 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms