RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 SHOC2Q9UQ13 582 aa15.01□□□□□ -0.01
NUP54-213ENST00000513352 COQ6Q9Y2Z9 468 aa15.01□□□□□ -0.01
NUP54-213ENST00000513352 UTP11Q9Y3A2 253 aaKnown RBP15.01□□□□□ -0.01
NUP54-213ENST00000513352 ZNF711Q9Y462 761 aa15.01□□□□□ -0.01
NUP54-213ENST00000513352 TCRBV7S3A2A0A539 114 aa15□□□□□ -0.01
NUP54-213ENST00000513352 GOLGA8MH3BSY2 632 aa15□□□□□ -0.01
NUP54-213ENST00000513352 DNALI1O14645 258 aaPredicted RBP15□□□□□ -0.01
NUP54-213ENST00000513352 RHOBTB1O94844 696 aa15□□□□□ -0.01
NUP54-213ENST00000513352 C6P13671 934 aa15□□□□□ -0.01
NUP54-213ENST00000513352 TPH1P17752 444 aa15□□□□□ -0.01
NUP54-213ENST00000513352 TPSB2P20231 275 aa15□□□□□ -0.01
NUP54-213ENST00000513352 SARNPP82979 210 aaKnown RBP15□□□□□ -0.01
NUP54-213ENST00000513352 RALGDSQ12967 914 aa15□□□□□ -0.01
NUP54-213ENST00000513352 KCNJ11Q14654 390 aa15□□□□□ -0.01
NUP54-213ENST00000513352 TPSAB1Q15661 275 aa15□□□□□ -0.01
NUP54-213ENST00000513352 CNGA3Q16281 694 aa15□□□□□ -0.01
NUP54-213ENST00000513352 PLK5Q496M5 336 aa15□□□□□ -0.01
NUP54-213ENST00000513352 LRRC66Q68CR7 880 aa15□□□□□ -0.01
NUP54-213ENST00000513352 NEK5Q6P3R8 708 aa15□□□□□ -0.01
NUP54-213ENST00000513352 CRTC1Q6UUV9 634 aa15□□□□□ -0.01
NUP54-213ENST00000513352 RANBP10Q6VN20 620 aa15□□□□□ -0.01
NUP54-213ENST00000513352 LIPIQ6XZB0 460 aa15□□□□□ -0.01
NUP54-213ENST00000513352 LYSMD3Q7Z3D4 306 aa15□□□□□ -0.01
NUP54-213ENST00000513352 GLT6D1Q7Z4J2 308 aa15□□□□□ -0.01
NUP54-213ENST00000513352 KLHDC8BQ8IXV7 354 aa15□□□□□ -0.01
NUP54-213ENST00000513352 PPIL6Q8IXY8 311 aa15□□□□□ -0.01
NUP54-213ENST00000513352 RGL4Q8IZJ4 473 aa15□□□□□ -0.01
NUP54-213ENST00000513352 CPT1BQ92523 772 aa15□□□□□ -0.01
NUP54-213ENST00000513352 SPOCK2Q92563 424 aa15□□□□□ -0.01
NUP54-213ENST00000513352 FOXJ1Q92949 421 aa15□□□□□ -0.01
NUP54-213ENST00000513352 SNF8Q96H20 258 aa15□□□□□ -0.01
NUP54-213ENST00000513352 MCCC1Q96RQ3 725 aaPredicted RBP15□□□□□ -0.01
NUP54-213ENST00000513352 MYOCQ99972 504 aa15□□□□□ -0.01
NUP54-213ENST00000513352 RAB17Q9H0T7 212 aa15□□□□□ -0.01
NUP54-213ENST00000513352 IRF2BPLQ9H1B7 796 aa15□□□□□ -0.01
NUP54-213ENST00000513352 MIR1-1HGQ9H1L0 117 aa15□□□□□ -0.01
NUP54-213ENST00000513352 PCED1AQ9H1Q7 454 aa15□□□□□ -0.01
NUP54-213ENST00000513352 FAM86C1Q9NVL1 165 aa15□□□□□ -0.01
NUP54-213ENST00000513352 TPX2Q9ULW0 747 aaKnown RBP15□□□□□ -0.01
NUP54-213ENST00000513352 ZFR2Q9UPR6 939 aaKnown RBP15□□□□□ -0.01
NUP54-213ENST00000513352 PPIL1Q9Y3C6 166 aa15□□□□□ -0.01
NUP54-213ENST00000513352 GON4LQ3T8J9 2241 aa15□□□□□ -0.01
NUP54-213ENST00000513352 MYLKQ15746 1914 aa15□□□□□ -0.01
NUP54-213ENST00000513352 SLC31A1O15431 190 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 LILRB5O75023 590 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 TM7SF2O76062 418 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 HEXIM1O94992 359 aaKnown RBP14.99□□□□□ -0.01
NUP54-213ENST00000513352 CLDN7O95471 211 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 LHCGRP22888 699 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 GRIA1P42261 906 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 CCR5P51681 352 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 SESN2P58004 480 aaPredicted RBP14.99□□□□□ -0.01
NUP54-213ENST00000513352 SLC7A5Q01650 507 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 CDH17Q12864 832 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 ANKRD22Q5VYY1 191 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 LYSMD4Q5XG99 296 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 PMS2CLQ68D20 193 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 PCGF5Q86SE9 256 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 TRIM69Q86WT6 500 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 SLC41A1Q8IVJ1 513 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 MMGT1Q8N4V1 131 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 NOA1Q8NC60 698 aaKnown RBP14.99□□□□□ -0.01
NUP54-213ENST00000513352 CADM4Q8NFZ8 388 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 BIRC7Q96CA5 298 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 SRPK1Q96SB4 655 aaKnown RBP14.99□□□□□ -0.01
NUP54-213ENST00000513352 LRRC1Q9BTT6 524 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 DUSP15Q9H1R2 295 aaPredicted RBP14.99□□□□□ -0.01
NUP54-213ENST00000513352 MAGEE1Q9HCI5 957 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 HACD3Q9P035 362 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 SNX24Q9Y343 169 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 SPO11Q9Y5K1 396 aa14.99□□□□□ -0.01
NUP54-213ENST00000513352 CACNA1HO95180 2353 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 ATXN2Q99700 1313 aaKnown RBP14.98□□□□□ -0.01
NUP54-213ENST00000513352 METTL12A8MUP2 240 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 TMEM63AO94886 807 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 SUN1O94901 812 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 IGHV4-34P06331 123 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 ZNF30P17039 623 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 CDK16Q00536 496 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 MTM1Q13496 603 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 POU6F1Q14863 301 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 ZNF284Q2VY69 593 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 SETMARQ53H47 684 aaPredicted RBP14.98□□□□□ -0.01
NUP54-213ENST00000513352 RNASEH2BQ5TBB1 312 aaKnown RBP14.98□□□□□ -0.01
NUP54-213ENST00000513352 DENND5AQ6IQ26 1287 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 CYP2U1Q7Z449 544 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 HINFPQ9BQA5 517 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 ERP44Q9BS26 406 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 C1QTNF7Q9BXJ2 289 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 KCNH6Q9H252 994 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 L2HGDHQ9H9P8 463 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 ZFYVE1Q9HBF4 777 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 FZD3Q9NPG1 666 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 ANAPC5Q9UJX4 755 aa14.98□□□□□ -0.01
NUP54-213ENST00000513352 FNDC3AQ9Y2H6 1198 aaKnown RBP14.98□□□□□ -0.01
NUP54-213ENST00000513352 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.98□□□□□ -0.01
NUP54-213ENST00000513352 CCDC78A2IDD5 438 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 BUD23O43709 281 aaKnown RBP14.97□□□□□ -0.01
NUP54-213ENST00000513352 RECQL5O94762 991 aaPredicted RBP14.97□□□□□ -0.01
NUP54-213ENST00000513352 PAK4O96013 591 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms