RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 TMCC1O94876 653 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 TPOP07202 933 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 HNRNPCP07910 306 aaKnown RBP eCLIP4.64□□□□□ -1.67
VPS13A-211ENST00000484581 TGFB3P10600 412 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 KLRC2P26717 231 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 HOXA7P31268 230 aaPredicted RBP4.64□□□□□ -1.67
VPS13A-211ENST00000484581 ALCAMQ13740 583 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 NAB2Q15742 525 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 HSPB2Q16082 182 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 SYTL3Q4VX76 610 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 LRRC8EQ6NSJ5 796 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 C11orf88Q6PI97 169 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 SRRM1Q8IYB3 904 aaKnown RBP4.64□□□□□ -1.67
VPS13A-211ENST00000484581 MMP21Q8N119 569 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 ZBTB8BQ8NAP8 495 aaPredicted RBP4.64□□□□□ -1.67
VPS13A-211ENST00000484581 NSMCE1Q8WV22 266 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 SMG7Q92540 1137 aaKnown RBP4.64□□□□□ -1.67
VPS13A-211ENST00000484581 KAT2AQ92830 837 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 ATOH1Q92858 354 aaPredicted RBP4.64□□□□□ -1.67
VPS13A-211ENST00000484581 MOAP1Q96BY2 351 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 CFAP57Q96MR6 1250 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 TMEM47Q9BQJ4 181 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 MXRA8Q9BRK3 442 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 GPATCH1Q9BRR8 931 aaKnown RBP4.64□□□□□ -1.67
VPS13A-211ENST00000484581 TM2D2Q9BX73 214 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 C1QTNF5Q9BXJ0 243 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 ANKRD2Q9GZV1 360 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 TKTL2Q9H0I9 626 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 ZNF304Q9HCX3 659 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 WDR6Q9NNW5 1121 aaKnown RBP4.64□□□□□ -1.67
VPS13A-211ENST00000484581 MLXIPLQ9NP71 852 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 IPO11Q9UI26 975 aaKnown RBP4.64□□□□□ -1.67
VPS13A-211ENST00000484581 CMAHPQ9Y471 501 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 A0A096LPK6 155 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 A0A0U1RQF3 1178 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 A0A1W2PR77 199 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 LRRC3CA6NJW4 275 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 A6NL46 340 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 CHL1O00533 1208 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 INPPL1O15357 1258 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 SLC25A17O43808 307 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 PROP1O75360 226 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 RBMXL2O75526 392 aaKnown RBP4.63□□□□□ -1.67
VPS13A-211ENST00000484581 DAB1O75553 588 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 TGDSO95455 350 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 PLAUP00749 431 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 SRD5A1P18405 259 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 SHMT1P34896 483 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 KRT2P35908 639 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 GP5P40197 560 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 GPR12P47775 334 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 CLCN3P51790 818 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 SLC12A2P55011 1212 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 SOX10P56693 466 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 PGM5Q15124 567 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 USP41Q3LFD5 358 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 CERKLQ49MI3 558 aaPredicted RBP4.63□□□□□ -1.67
VPS13A-211ENST00000484581 CST9LP1Q5W188 147 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 AAGABQ6PD74 315 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 QSOX2Q6ZRP7 698 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 RBPMS2Q6ZRY4 209 aaKnown RBP4.63□□□□□ -1.67
VPS13A-211ENST00000484581 METTL23Q86XA0 190 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 ZCCHC9Q8N567 271 aaKnown RBP4.63□□□□□ -1.67
VPS13A-211ENST00000484581 ARL14EPQ8N8R7 260 aaPredicted RBP4.63□□□□□ -1.67
VPS13A-211ENST00000484581 XXYLT1Q8NBI6 393 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 HJURPQ8NCD3 748 aaPredicted RBP4.63□□□□□ -1.67
VPS13A-211ENST00000484581 MCUQ8NE86 351 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 DEPDC1BQ8WUY9 529 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 FAM162AQ96A26 154 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 RNF183Q96D59 192 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 ZC3HAV1LQ96H79 300 aaKnown RBP4.63□□□□□ -1.67
VPS13A-211ENST00000484581 CLMNQ96JQ2 1002 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 GBP5Q96PP8 586 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 SLITRK1Q96PX8 696 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 CCDC106Q9BWC9 280 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 MRPL9Q9BYD2 267 aaKnown RBP4.63□□□□□ -1.67
VPS13A-211ENST00000484581 KLK15Q9H2R5 256 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 BPIFA1Q9NP55 256 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 PFDN4Q9NQP4 134 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 AMACRQ9UHK6 382 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 OSGIN1Q9UJX0 560 aa4.63□□□□□ -1.67
VPS13A-211ENST00000484581 TRBV5-7A0A0A0MS05 114 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 LNP1A1A4G5 178 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 SLC22A23A1A5C7 686 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 TYW5A2RUC4 315 aaKnown RBP4.62□□□□□ -1.67
VPS13A-211ENST00000484581 URADA6NGE7 173 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 KLRF2D3W0D1 207 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 PSMA7O14818 248 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 MGST3O14880 152 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 RNF8O76064 485 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 C22orf31O95567 290 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 ATP5BP06576 529 aaKnown RBP4.62□□□□□ -1.67
VPS13A-211ENST00000484581 UNGP13051 313 aaPredicted RBP4.62□□□□□ -1.67
VPS13A-211ENST00000484581 AGAP20933 346 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 PTAFRP25105 342 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 CXCL9Q07325 125 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 SRSF4Q08170 494 aaKnown RBP4.62□□□□□ -1.67
VPS13A-211ENST00000484581 DDR1Q08345 913 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 FOXF2Q12947 444 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 CAMK2DQ13557 499 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms