RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 INPP5AQ14642 412 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 ACOX1Q15067 660 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 TCEA2Q15560 299 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 WHAMMP3Q1A5X7 153 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 PAPD7Q5XG87 772 aaKnown RBP8.31□□□□□ -1.08
HDAC6-221ENST00000477561 TIGD7Q6NT04 549 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-221ENST00000477561 C11orf63Q6NUN7 778 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 MFSD7Q6UXD7 560 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 UNQ6494/PRO21346Q6UXR6 183 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 LIPIQ6XZB0 460 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 DPPA4Q7L190 304 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 RD3Q7Z3Z2 195 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 PEX26Q7Z412 305 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 DAAM2Q86T65 1068 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 PARGQ86W56 976 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 RFX6Q8HWS3 928 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 LRRC49Q8IUZ0 686 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 RHOT1Q8IXI2 618 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 CCDC13Q8IYE1 715 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 RBFAQ8N0V3 343 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 TEX26Q8N6G2 289 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 PLD5Q8N7P1 536 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 PLA2G15Q8NCC3 412 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 LMX1AQ8TE12 382 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 TSACCQ96A04 125 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-221ENST00000477561 LGMNQ99538 433 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 C1QTNF7Q9BXJ2 289 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 CEP41Q9BYV8 373 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 L2HGDHQ9H9P8 463 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 B4GALT6Q9UBX8 382 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 CDC23Q9UJX2 597 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 AMFRQ9UKV5 643 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 MSRB2Q9Y3D2 182 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 NEUROG3Q9Y4Z2 214 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 OR1A2Q9Y585 309 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 RAI2Q9Y5P3 530 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 ALG6Q9Y672 507 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 SAR1BQ9Y6B6 198 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 CABIN1Q9Y6J0 2220 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 CEP295Q9C0D2 2601 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 CHD8Q9HCK8 2581 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 H3BM21 787 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 HTRA2O43464 458 aaPredicted RBP8.3□□□□□ -1.08
HDAC6-221ENST00000477561 SOCS5O75159 536 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 DKK1O94907 266 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 PGLSO95336 258 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 HLA-DQB2P05538 268 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 ALPIP09923 528 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 GIMD1P0DJR0 217 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 KRT10P13645 584 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 NME1P15531 152 aaKnown RBP8.3□□□□□ -1.08
HDAC6-221ENST00000477561 CKMT2P17540 419 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 GM2AP17900 193 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 MX2P20592 715 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 SLC1A1P43005 524 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 MARCKSL1P49006 195 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 ACADVLP49748 655 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 TERF1P54274 439 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 YPEL5P62699 121 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 DAB2P98082 770 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 CKAP4Q07065 602 aaKnown RBP8.3□□□□□ -1.08
HDAC6-221ENST00000477561 NIPAL4Q0D2K0 466 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 AP1B1Q10567 949 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 PTK2BQ14289 1009 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 RPS6KA1Q15418 735 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 CNGA3Q16281 694 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 ST3GAL2Q16842 350 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 DEFB133Q30KQ1 61 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 PROX2Q3B8N5 592 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 ARMC12Q5T9G4 340 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 FAXCQ5TGI0 409 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 MEI1Q5TIA1 1274 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 LRRC38Q5VT99 294 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 KAZNQ674X7 775 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 SLC9A4Q6AI14 798 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 ENPP7Q6UWV6 458 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 TSPAN33Q86UF1 283 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 HID1Q8IV36 788 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 PELI3Q8N2H9 469 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 CEP112Q8N8E3 955 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 LRRC57Q8N9N7 239 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 ZNF548Q8NEK5 533 aaPredicted RBP8.3□□□□□ -1.08
HDAC6-221ENST00000477561 OR4C6Q8NH72 309 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 MAML1Q92585 1016 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 GATA6Q92908 595 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 IFT43Q96FT9 208 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 TSGA13Q96PP4 275 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 APOOQ9BUR5 198 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 TMEM121BQ9BXQ6 578 aaPredicted RBP8.3□□□□□ -1.08
HDAC6-221ENST00000477561 POLR1EQ9GZS1 481 aaKnown RBP8.3□□□□□ -1.08
HDAC6-221ENST00000477561 DDX56Q9NY93 547 aaKnown RBP8.3□□□□□ -1.08
HDAC6-221ENST00000477561 SEPT10Q9P0V9 454 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 SAE1Q9UBE0 346 aaPredicted RBP8.3□□□□□ -1.08
HDAC6-221ENST00000477561 PHTF1Q9UMS5 762 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 SNX12Q9UMY4 172 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 CHKBQ9Y259 395 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 MRFAP1Q9Y605 127 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 WDFY3Q8IZQ1 3526 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 SHROOM3Q8TF72 1996 aa8.3□□□□□ -1.08
HDAC6-221ENST00000477561 CFAP69A5D8W1 941 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms