RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 HEXIM1O94992 359 aaKnown RBP12.94□□□□□ -0.34
COL5A1-206ENST00000465877 TRBC1P01850 177 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 PCCBP05166 539 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 ITGAVP06756 1048 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 ALPIP09923 528 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 CCDC175P0C221 793 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 CTPS1P17812 591 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 PTPN3P26045 913 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 THOP1P52888 689 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 EPHB1P54762 984 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 SIM1P81133 766 aaPredicted RBP12.94□□□□□ -0.34
COL5A1-206ENST00000465877 SKOR1P84550 965 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 FOXK2Q01167 660 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 OTUD4Q01804 1114 aaKnown RBP12.94□□□□□ -0.34
COL5A1-206ENST00000465877 FZD2Q14332 565 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 NOMO1Q15155 1222 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 WSCD2Q2TBF2 565 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 CCDC181Q5TID7 509 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 AADACL2Q6P093 401 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 KANSL1Q7Z3B3 1105 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 TSPAN33Q86UF1 283 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 ZC3H18Q86VM9 953 aaKnown RBP12.94□□□□□ -0.34
COL5A1-206ENST00000465877 DCP2Q8IU60 420 aaKnown RBP12.94□□□□□ -0.34
COL5A1-206ENST00000465877 RNF10Q8N5U6 811 aaKnown RBP12.94□□□□□ -0.34
COL5A1-206ENST00000465877 LPCAT1Q8NF37 534 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 RHBDD1Q8TEB9 315 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 PIH1D2Q8WWB5 315 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 PCDH9Q9HC56 1237 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 GUCA1BQ9UMX6 200 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 CHKBQ9Y259 395 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 FRYQ5TBA9 3013 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 AKAP13Q12802 2813 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 HACD1B0YJ81 288 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 PSMD11O00231 422 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 DDX3YO15523 660 aaKnown RBP12.93□□□□□ -0.34
COL5A1-206ENST00000465877 PYGMP11217 842 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 CETN2P41208 172 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 YPEL5P62699 121 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 WASHC5Q12768 1159 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 BNIP3Q12983 259 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 ZNF211Q13398 564 aaPredicted RBP12.93□□□□□ -0.34
COL5A1-206ENST00000465877 MTM1Q13496 603 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 ARHGEF7Q14155 803 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 GALNT3Q14435 633 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 ACOX1Q15067 660 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 N4BP2L1Q5TBK1 243 aaPredicted RBP12.93□□□□□ -0.34
COL5A1-206ENST00000465877 LRRC66Q68CR7 880 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 ESRP1Q6NXG1 681 aaKnown RBP12.93□□□□□ -0.34
COL5A1-206ENST00000465877 MACC1Q6ZN28 852 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 GLRX5Q86SX6 157 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 ACTL9Q8TC94 416 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 NUS1Q96E22 293 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 DTD2Q96FN9 168 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 IFT43Q96FT9 208 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 SCRN2Q96FV2 425 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 IMP4Q96G21 291 aaKnown RBP12.93□□□□□ -0.34
COL5A1-206ENST00000465877 HES6Q96HZ4 224 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 COQ10AQ96MF6 247 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 SMIM14Q96QK8 99 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 RBM15Q96T37 977 aaKnown RBP eCLIP12.93□□□□□ -0.34
COL5A1-206ENST00000465877 SLC25A51Q9H1U9 297 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 CAAP1Q9H8G2 361 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 DNAJC28Q9NX36 388 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 FTSJ1Q9UET6 329 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 EFR3BQ9Y2G0 817 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 PPIL1Q9Y3C6 166 aa12.93□□□□□ -0.34
COL5A1-206ENST00000465877 H3BM21 787 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 TOR1BO14657 336 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 MTSS1O43312 755 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 PIAS2O75928 621 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 PRLP01236 227 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 FTH1P19P0C7X4 201 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 NME1P15531 152 aaKnown RBP12.92□□□□□ -0.34
COL5A1-206ENST00000465877 NFKB1P19838 968 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 HNF1BP35680 557 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 RPL26P61254 145 aaKnown RBP12.92□□□□□ -0.34
COL5A1-206ENST00000465877 XRCC4Q13426 336 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 PTK2BQ14289 1009 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 NFATC4Q14934 902 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 PTPRRQ15256 657 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 TRIP6Q15654 476 aaKnown RBP12.92□□□□□ -0.34
COL5A1-206ENST00000465877 SLC14A2Q15849 920 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 TEX44Q53QW1 395 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 ZNF542PQ5EBM4 170 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 DENND2CQ68D51 928 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 HSD11B1LQ7Z5J1 315 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 CDKL3Q8IVW4 592 aaPredicted RBP12.92□□□□□ -0.34
COL5A1-206ENST00000465877 NDUFAF2Q8N183 169 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 PLA2G15Q8NCC3 412 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 HTR3CQ8WXA8 447 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 TEKT5Q96M29 485 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 ALS2CR12Q96Q35 445 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 CDC6Q99741 560 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 GLOD4Q9HC38 313 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 KLHL8Q9P2G9 620 aaPredicted RBP12.92□□□□□ -0.34
COL5A1-206ENST00000465877 DNPEPQ9ULA0 475 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 RPL26L1Q9UNX3 145 aaKnown RBP12.92□□□□□ -0.34
COL5A1-206ENST00000465877 OR1A2Q9Y585 309 aa12.92□□□□□ -0.34
COL5A1-206ENST00000465877 CHD8Q9HCK8 2581 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 A0A0U1RQS6 177 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 353.9 ms