RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 PSMD5Q16401 504 aa11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 UGT3A2Q3SY77 523 aa11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 KCTD21Q4G0X4 260 aa11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 AARS2Q5JTZ9 985 aaKnown RBP11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 NEPROQ6NW34 567 aa11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 PATL1Q86TB9 770 aaKnown RBP11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 GIPC3Q8TF64 312 aa11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 RNF34Q969K3 372 aa11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 C19orf60Q96EN9 201 aa11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 MRGPRX2Q96LB1 330 aa11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 FSD1LQ9BXM9 530 aa11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 EML4Q9HC35 981 aaKnown RBP11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 AGPAT4Q9NRZ5 378 aa11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 CMTM6Q9NX76 183 aa11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 AAR2Q9Y312 384 aaKnown RBP11.77□□□□□ -0.53
PDZRN3-203ENST00000462146 RNF103-CHMP3A0A140T963 221 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 OR51F1A6NGY5 319 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 TRIM64CA6NLI5 447 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 FXYD1O00168 92 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 EI24O14681 340 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 SIX3O95343 332 aaPredicted RBP11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 NCK1P16333 377 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 CES1P23141 567 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 CCR3P51677 355 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 AIF1P55008 147 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 CDKN2DP55273 166 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 SLC36A3Q495N2 470 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 FBXO48Q5FWF7 155 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 IFNEQ86WN2 208 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 SLC15A3Q8IY34 581 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 ATPAF2Q8N5M1 289 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 FCRL5Q96RD9 977 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 GPATCH1Q9BRR8 931 aaKnown RBP11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 SLC39A8Q9C0K1 460 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 CXorf21Q9HAI6 301 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 TMEM165Q9HC07 324 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 GPRC5DQ9NZD1 345 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 ZNHIT2Q9UHR6 403 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 USP22Q9UPT9 525 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 V9GYQ6 96 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 TTC24A2A3L6 582 aaPredicted RBP11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 GIPC1O14908 333 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 ACOX3O15254 700 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 MAFKO60675 156 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 STAMBPO95630 424 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 BDNFP23560 247 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 CXCR3P49682 368 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 ESRRGP62508 458 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 SH3BP2P78314 561 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 UNC50Q53HI1 259 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 UBXN11Q5T124 520 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 HECTD2Q5U5R9 776 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 AGAP9Q5VTM2 703 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 MFSD2AQ8NA29 543 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 PTERQ96BW5 349 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 FAR2Q96K12 515 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 PAIP1Q9H074 479 aaKnown RBP11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 VPS45Q9NRW7 570 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 DOLKQ9UPQ8 538 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 DICER1Q9UPY3 1922 aaKnown RBP11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 A0A1B0GTL3 188 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 ASB14A6NK59 587 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 DNAJB1P25685 340 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 PNPLA4P41247 253 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 MAGEA10P43363 369 aaPredicted RBP11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 AFF1P51825 1210 aaKnown RBP11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 PLCL1Q15111 1095 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 NEDD8Q15843 81 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 ATP6AP1Q15904 470 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 ZNF678Q5SXM1 525 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 PM20D1Q6GTS8 502 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 OGFOD2Q6N063 350 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 ERO1BQ86YB8 467 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 KLHDC8BQ8IXV7 354 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 ADGRG5Q8IZF4 528 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 AFAP1L2Q8N4X5 818 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 TOP6BLQ8N6T0 577 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 OR52K2Q8NGK3 314 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 TANKQ92844 425 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 NSUN5Q96P11 429 aaKnown RBP11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 TSGA13Q96PP4 275 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 HIPK3Q9H422 1215 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 SLC38A7Q9NVC3 462 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 DNAJC15Q9Y5T4 150 aa11.76□□□□□ -0.53
PDZRN3-203ENST00000462146 HHLA1C9JL84 531 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 PTGESO14684 152 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 ARPC2O15144 300 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 B4GAT1O43505 415 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 SLC4A1P02730 911 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 MMP3P08254 477 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 HSPA8P11142 646 aaKnown RBP11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 DARSP14868 501 aaKnown RBP11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 CCT8P50990 548 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 KPNA2P52292 529 aaKnown RBP11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 STX1BP61266 288 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 BNIP3Q12983 259 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 INTS11Q5TA45 600 aaKnown RBP11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 KIAA0930Q6ICG6 404 aaPredicted RBP11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 HACD2Q6Y1H2 254 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms