RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 VIPR1P32241 457 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 ARHGAP25P42331 645 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 KIAA1024LP59773 190 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 ACOX1Q15067 660 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 IFI16Q16666 785 aaKnown RBP18.97■□□□□ 0.63
COL5A1-203ENST00000460264 CDKN3Q16667 212 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 C6orf132Q5T0Z8 1188 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 ZFYVE27Q5T4F4 411 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 KCTD16Q68DU8 428 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 GUSBP11Q6P575 273 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 ENPP7Q6UWV6 458 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 RHOT2Q8IXI1 618 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 FSTL5Q8N475 847 aaPredicted RBP18.97■□□□□ 0.63
COL5A1-203ENST00000460264 ATL2Q8NHH9 583 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 WDR92Q96MX6 357 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 TSGA13Q96PP4 275 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 MCCC1Q96RQ3 725 aaPredicted RBP18.97■□□□□ 0.63
COL5A1-203ENST00000460264 POLR1EQ9GZS1 481 aaKnown RBP18.97■□□□□ 0.63
COL5A1-203ENST00000460264 KLQ9UEF7 1012 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 PHTF1Q9UMS5 762 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 RAXQ9Y2V3 346 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 NBEAQ8NFP9 2946 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 LRRD1A4D1F6 860 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 NPIPB15A6NHN6 443 aaPredicted RBP18.96■□□□□ 0.63
COL5A1-203ENST00000460264 MATN3O15232 486 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 YY2O15391 372 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 MT-CO3P00414 261 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 LHCGRP22888 699 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 KDELR1P24390 212 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 CCNCP24863 283 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 NFKBIAP25963 317 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 SRP54P61011 504 aaKnown RBP18.96■□□□□ 0.63
COL5A1-203ENST00000460264 NR0B2Q15466 257 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 ARMC12Q5T9G4 340 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 CDCP2Q5VXM1 449 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 ESRP1Q6NXG1 681 aaKnown RBP18.96■□□□□ 0.63
COL5A1-203ENST00000460264 RD3Q7Z3Z2 195 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 SLC35F3Q8IY50 421 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 PELI3Q8N2H9 469 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 FUBP1Q96AE4 644 aaKnown RBP18.96■□□□□ 0.63
COL5A1-203ENST00000460264 NUS1Q96E22 293 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 PDXPQ96GD0 296 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 RNF157Q96PX1 679 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 NRSN2Q9GZP1 204 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 DTLQ9NZJ0 730 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 RAI2Q9Y5P3 530 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 ADAMTS20P59510 1910 aa18.96■□□□□ 0.63
COL5A1-203ENST00000460264 CPED1A4D0V7 1026 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 EME2A4GXA9 379 aaPredicted RBP18.95■□□□□ 0.62
COL5A1-203ENST00000460264 ZNF487B1APH4 448 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 CACNB4O00305 520 aaPredicted RBP18.95■□□□□ 0.62
COL5A1-203ENST00000460264 ALPIP09923 528 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 CYP2A6P11509 494 aaPredicted RBP18.95■□□□□ 0.62
COL5A1-203ENST00000460264 MX2P20592 715 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 TRIM23P36406 574 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 SLC10A2Q12908 348 aaPredicted RBP18.95■□□□□ 0.62
COL5A1-203ENST00000460264 IHHQ14623 411 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 RTP5Q14D33 572 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 PTPRRQ15256 657 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 ELOCQ15369 112 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 TCEA2Q15560 299 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 PNCKQ6P2M8 343 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 USP45Q70EL2 814 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 EFL1Q7Z2Z2 1120 aaKnown RBP18.95■□□□□ 0.62
COL5A1-203ENST00000460264 HSD11B1LQ7Z5J1 315 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 PLD5Q8N7P1 536 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 LRRN4Q8WUT4 740 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 PIH1D2Q8WWB5 315 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 OR1E3Q8WZA6 343 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 HDAC11Q96DB2 347 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 SCRN2Q96FV2 425 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 TRIM5Q9C035 493 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 WDR26Q9H7D7 661 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 FGF22Q9HCT0 170 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 RBM22Q9NW64 420 aaKnown RBP eCLIP18.95■□□□□ 0.62
COL5A1-203ENST00000460264 AMACRQ9UHK6 382 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 INTUQ9ULD6 942 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 PPIL1Q9Y3C6 166 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 GPSM3Q9Y4H4 160 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 DGKBQ9Y6T7 804 aa18.95■□□□□ 0.62
COL5A1-203ENST00000460264 URB1O60287 2271 aaKnown RBP18.95■□□□□ 0.62
COL5A1-203ENST00000460264 TMEM202A6NGA9 273 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 C3orf70A6NLC5 250 aaPredicted RBP18.94■□□□□ 0.62
COL5A1-203ENST00000460264 PSMD11O00231 422 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 FZD6O60353 706 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 HLA-DQB2P05538 268 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 PDHA1P08559 390 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 HOXC4P09017 264 aaPredicted RBP18.94■□□□□ 0.62
COL5A1-203ENST00000460264 CTSEP14091 401 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 CCNB1P14635 433 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 RPIAP49247 311 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 DSC2Q02487 901 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 ITKQ08881 620 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 TCEAL1Q15170 157 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 LRRC38Q5VT99 294 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 DENND2CQ68D51 928 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 TSPAN33Q86UF1 283 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 VSIG1Q86XK7 387 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 CBARPQ8N350 705 aaPredicted RBP18.94■□□□□ 0.62
COL5A1-203ENST00000460264 SDR16C5Q8N3Y7 309 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms