RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 CTAGE4Q8IX94 777 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 TBC1D3Q8IZP1 549 aaPredicted RBP9.23□□□□□ -0.93
RFX3-207ENST00000449190 TAB3Q8N5C8 712 aaPredicted RBP9.23□□□□□ -0.93
RFX3-207ENST00000449190 AADATQ8N5Z0 425 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 CEP112Q8N8E3 955 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 IPMKQ8NFU5 416 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 SPATA22Q8NHS9 363 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 FAM131CQ96AQ9 280 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 BIRC7Q96CA5 298 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 FEM1CQ96JP0 617 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 SRPK1Q96SB4 655 aaKnown RBP9.23□□□□□ -0.93
RFX3-207ENST00000449190 KRT12Q99456 494 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 MIR1-1HGQ9H1L0 117 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 RAB6BQ9NRW1 208 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 PCYOX1Q9UHG3 505 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 CHKBQ9Y259 395 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.23□□□□□ -0.93
RFX3-207ENST00000449190 MRFAP1Q9Y605 127 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 ATXN2Q99700 1313 aaKnown RBP9.23□□□□□ -0.93
RFX3-207ENST00000449190 A0A1W2PPC4 97 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 TSPAN11A1L157 253 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 ERI2A8K979 691 aaKnown RBP9.22□□□□□ -0.93
RFX3-207ENST00000449190 UPK3BL1B0FP48 263 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 UPK3BL2E5RIL1 263 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 AP3B1O00203 1094 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 PLK4O00444 970 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 TRAFD1O14545 582 aaPredicted RBP9.22□□□□□ -0.93
RFX3-207ENST00000449190 NDC80O14777 642 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 TSPAN6O43657 245 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 AP1G1O43747 822 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 GJB3O75712 270 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 METTL18O95568 372 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 NDST3O95803 873 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 MT-CYBP00156 380 aaPredicted RBP9.22□□□□□ -0.93
RFX3-207ENST00000449190 EPOP01588 193 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 MMP2P08253 660 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 ZSCAN5DPP0CG00 497 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 ADRB3P13945 408 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 ETS1P14921 441 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 DRD3P35462 400 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 VPS41P49754 854 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 C2orf54Q08AI8 447 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 GPS1Q13098 491 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 TEAD4Q15561 434 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 TRIP13Q15645 432 aaPredicted RBP9.22□□□□□ -0.93
RFX3-207ENST00000449190 UGP2Q16851 508 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 FAM182AQ5T1J6 154 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 NEK5Q6P3R8 708 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 IL27RAQ6UWB1 636 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 PPP1R21Q6ZMI0 780 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 PARS2Q7L3T8 475 aaKnown RBP9.22□□□□□ -0.93
RFX3-207ENST00000449190 PCGF5Q86SE9 256 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 LINC00523Q86TU6 105 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 LPCAT1Q8NF37 534 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 CXorf40AQ8TE69 158 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 ECHDC3Q96DC8 303 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 MLPHQ9BV36 600 aaPredicted RBP9.22□□□□□ -0.93
RFX3-207ENST00000449190 FICDQ9BVA6 458 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 TDRD1Q9BXT4 1180 aaKnown RBP9.22□□□□□ -0.93
RFX3-207ENST00000449190 LRRC40Q9H9A6 602 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 ETNK1Q9HBU6 452 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 PREBQ9HCU5 417 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 PCDH12Q9NPG4 1184 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 DNAAF2Q9NVR5 837 aaKnown RBP9.22□□□□□ -0.93
RFX3-207ENST00000449190 SERGEFQ9UGK8 458 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 ASIC3Q9UHC3 531 aa9.22□□□□□ -0.93
RFX3-207ENST00000449190 FAM187AA6NFU0 413 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 ANKRD66B4E2M5 251 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 PLRG1O43660 514 aaKnown RBP9.21□□□□□ -0.94
RFX3-207ENST00000449190 IGHV4-34P06331 123 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 APRTP07741 180 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 CTPS1P17812 591 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 HLA-DPA1P20036 260 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 CSRP1P21291 193 aaKnown RBP9.21□□□□□ -0.94
RFX3-207ENST00000449190 VIPR1P32241 457 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 NUDT1P36639 197 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 GRIA4P48058 902 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 CSNK1EP49674 416 aaKnown RBP9.21□□□□□ -0.94
RFX3-207ENST00000449190 METAP1P53582 386 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 RPS21P63220 83 aaKnown RBP9.21□□□□□ -0.94
RFX3-207ENST00000449190 RACK1P63244 317 aaKnown RBP9.21□□□□□ -0.94
RFX3-207ENST00000449190 BASP1P80723 227 aaKnown RBP9.21□□□□□ -0.94
RFX3-207ENST00000449190 SGCGQ13326 291 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 SLC14A1Q13336 389 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 ARHGEF7Q14155 803 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 UAP1L1Q3KQV9 507 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 PIP5KL1Q5T9C9 394 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 FAXCQ5TGI0 409 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 AGBL4Q5VU57 503 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 NAPEPLDQ6IQ20 393 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 KDELC1Q6UW63 502 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 ZNF572Q7Z3I7 529 aaPredicted RBP9.21□□□□□ -0.94
RFX3-207ENST00000449190 PRUNE1Q86TP1 453 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 ZCCHC9Q8N567 271 aaKnown RBP9.21□□□□□ -0.94
RFX3-207ENST00000449190 SLC25A41Q8N5S1 370 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 DNAAF3Q8N9W5 541 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 SNX19Q92543 992 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 SLCO2A1Q92959 643 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 SKA1Q96BD8 255 aa9.21□□□□□ -0.94
RFX3-207ENST00000449190 TADA1Q96BN2 335 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms