RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 HGSNATQ68CP4 663 aa21.1■□□□□ 0.97
VSX1-206ENST00000444511 TAF8Q7Z7C8 310 aa21.1■□□□□ 0.97
VSX1-206ENST00000444511 ARL14Q8N4G2 192 aa21.1■□□□□ 0.97
VSX1-206ENST00000444511 ATPAF2Q8N5M1 289 aa21.1■□□□□ 0.97
VSX1-206ENST00000444511 OR6C4Q8NGE1 309 aa21.1■□□□□ 0.97
VSX1-206ENST00000444511 SLC39A7Q92504 469 aa21.1■□□□□ 0.97
VSX1-206ENST00000444511 GFM1Q96RP9 751 aaKnown RBP21.1■□□□□ 0.97
VSX1-206ENST00000444511 NUDCD1Q96RS6 583 aa21.1■□□□□ 0.97
VSX1-206ENST00000444511 DPH1Q9BZG8 443 aa21.1■□□□□ 0.97
VSX1-206ENST00000444511 THAP2Q9H0W7 228 aa21.1■□□□□ 0.97
VSX1-206ENST00000444511 WDR26Q9H7D7 661 aa21.1■□□□□ 0.97
VSX1-206ENST00000444511 FGF22Q9HCT0 170 aa21.1■□□□□ 0.97
VSX1-206ENST00000444511 RABGEF1Q9UJ41 708 aa21.1■□□□□ 0.97
VSX1-206ENST00000444511 ASXL3Q9C0F0 2248 aa21.09■□□□□ 0.97
VSX1-206ENST00000444511 CCDC187A0A096LP49 1063 aa21.09■□□□□ 0.97
VSX1-206ENST00000444511 A0A1W2PQJ5 194 aa21.09■□□□□ 0.97
VSX1-206ENST00000444511 NTN3O00634 580 aaPredicted RBP21.09■□□□□ 0.97
VSX1-206ENST00000444511 HTRA2O43464 458 aaPredicted RBP21.09■□□□□ 0.97
VSX1-206ENST00000444511 MAFKO60675 156 aa21.09■□□□□ 0.97
VSX1-206ENST00000444511 CPP00450 1065 aa21.09■□□□□ 0.97
VSX1-206ENST00000444511 HOXC4P09017 264 aaPredicted RBP21.09■□□□□ 0.97
VSX1-206ENST00000444511 GM2AP17900 193 aa21.09■□□□□ 0.97
VSX1-206ENST00000444511 PDX1P52945 283 aa21.09■□□□□ 0.97
VSX1-206ENST00000444511 FANCCQ00597 558 aa21.09■□□□□ 0.97
VSX1-206ENST00000444511 TEKT4Q8WW24 435 aa21.09■□□□□ 0.97
VSX1-206ENST00000444511 SPOCK2Q92563 424 aa21.09■□□□□ 0.97
VSX1-206ENST00000444511 SYN2Q92777 582 aaPredicted RBP21.09■□□□□ 0.97
VSX1-206ENST00000444511 FUCA2Q9BTY2 467 aa21.09■□□□□ 0.97
VSX1-206ENST00000444511 PCDH18Q9HCL0 1135 aa21.09■□□□□ 0.97
VSX1-206ENST00000444511 MRPL40Q9NQ50 206 aaKnown RBP21.09■□□□□ 0.97
VSX1-206ENST00000444511 IP6K2Q9UHH9 426 aa21.09■□□□□ 0.97
VSX1-206ENST00000444511 MOSPD1Q9UJG1 213 aa21.09■□□□□ 0.97
VSX1-206ENST00000444511 ANAPC7Q9UJX3 599 aa21.09■□□□□ 0.97
VSX1-206ENST00000444511 LRRK1Q38SD2 2015 aa21.09■□□□□ 0.97
VSX1-206ENST00000444511 SMG1Q96Q15 3661 aaKnown RBP21.08■□□□□ 0.97
VSX1-206ENST00000444511 TK2O00142 265 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 PDE2AO00408 941 aaPredicted RBP21.08■□□□□ 0.97
VSX1-206ENST00000444511 TNFRSF10CO14798 259 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 PEX11BO96011 259 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 SERPING1P05155 500 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 RPLP0P05388 317 aaKnown RBP21.08■□□□□ 0.97
VSX1-206ENST00000444511 CR2P20023 1033 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 VIPR1P32241 457 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 TRIM23P36406 574 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 CDH6P55285 790 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 KRT81Q14533 505 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 MARC1Q5VT66 337 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 DENND2CQ68D51 928 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 TXNRD3NBQ6F5E7 133 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 PNCKQ6P2M8 343 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 PGBD5Q8N414 524 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 NIPA2Q8N8Q9 360 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 FAM46DQ8NEK8 389 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 NUS1Q96E22 293 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 CCDC97Q96F63 343 aaPredicted RBP21.08■□□□□ 0.97
VSX1-206ENST00000444511 PRR11Q96HE9 360 aaPredicted RBP21.08■□□□□ 0.97
VSX1-206ENST00000444511 BTBD6Q96KE9 485 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 COQ10AQ96MF6 247 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 MGME1Q9BQP7 344 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 NUP85Q9BW27 656 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 LGR4Q9BXB1 951 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 NOD2Q9HC29 1040 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 CBX8Q9HC52 389 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 CYP4F12Q9HCS2 524 aa21.08■□□□□ 0.97
VSX1-206ENST00000444511 COL27A1Q8IZC6 1860 aaPredicted RBP21.07■□□□□ 0.96
VSX1-206ENST00000444511 FASNP49327 2511 aaKnown RBP21.07■□□□□ 0.96
VSX1-206ENST00000444511 PMS2P1A4D2B8 440 aa21.07■□□□□ 0.96
VSX1-206ENST00000444511 D6RAR5 112 aa21.07■□□□□ 0.96
VSX1-206ENST00000444511 TNFSF15O95150 251 aa21.07■□□□□ 0.96
VSX1-206ENST00000444511 CYP2A6P11509 494 aaPredicted RBP21.07■□□□□ 0.96
VSX1-206ENST00000444511 MLLT3P42568 568 aaPredicted RBP21.07■□□□□ 0.96
VSX1-206ENST00000444511 SSR1P43307 286 aaKnown RBP21.07■□□□□ 0.96
VSX1-206ENST00000444511 MMP13P45452 471 aa21.07■□□□□ 0.96
VSX1-206ENST00000444511 UBASH3AP57075 661 aa21.07■□□□□ 0.96
VSX1-206ENST00000444511 MAXP61244 160 aa21.07■□□□□ 0.96
VSX1-206ENST00000444511 CCL7P80098 99 aa21.07■□□□□ 0.96
VSX1-206ENST00000444511 NFKBIBQ15653 356 aa21.07■□□□□ 0.96
VSX1-206ENST00000444511 CNGA3Q16281 694 aa21.07■□□□□ 0.96
VSX1-206ENST00000444511 TSR1Q2NL82 804 aaKnown RBP21.07■□□□□ 0.96
VSX1-206ENST00000444511 LUZP1Q86V48 1076 aa21.07■□□□□ 0.96
VSX1-206ENST00000444511 LSM14AQ8ND56 463 aaKnown RBP21.07■□□□□ 0.96
VSX1-206ENST00000444511 GPR156Q8NFN8 814 aa21.07■□□□□ 0.96
VSX1-206ENST00000444511 CPLX3Q8WVH0 158 aa21.07■□□□□ 0.96
VSX1-206ENST00000444511 LIN37Q96GY3 246 aaPredicted RBP21.07■□□□□ 0.96
VSX1-206ENST00000444511 TMEM168Q9H0V1 697 aa21.07■□□□□ 0.96
VSX1-206ENST00000444511 CPNE5Q9HCH3 593 aa21.07■□□□□ 0.96
VSX1-206ENST00000444511 EPB41L5Q9HCM4 733 aa21.07■□□□□ 0.96
VSX1-206ENST00000444511 KCTD5Q9NXV2 234 aa21.07■□□□□ 0.96
VSX1-206ENST00000444511 PHTF1Q9UMS5 762 aa21.07■□□□□ 0.96
VSX1-206ENST00000444511 PTPRQQ9UMZ3 2332 aa21.07■□□□□ 0.96
VSX1-206ENST00000444511 SYCE3A1L190 88 aa21.06■□□□□ 0.96
VSX1-206ENST00000444511 B4DGG1 531 aa21.06■□□□□ 0.96
VSX1-206ENST00000444511 TMX2-CTNND1H3BSU7 103 aa21.06■□□□□ 0.96
VSX1-206ENST00000444511 HEXIM1O94992 359 aaKnown RBP21.06■□□□□ 0.96
VSX1-206ENST00000444511 PRB1P04280 392 aa21.06■□□□□ 0.96
VSX1-206ENST00000444511 MYCLP1P12525 358 aaPredicted RBP21.06■□□□□ 0.96
VSX1-206ENST00000444511 PBX1P40424 430 aa21.06■□□□□ 0.96
VSX1-206ENST00000444511 ZBED6P86452 979 aa21.06■□□□□ 0.96
VSX1-206ENST00000444511 SLC25A11Q02978 314 aaKnown RBP21.06■□□□□ 0.96
VSX1-206ENST00000444511 TRAF2Q12933 501 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 245.4 ms