RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 PDLIM7Q9NR12 457 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 PCDHB9Q9Y5E1 797 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 VGLL3A8MV65 326 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 MRASO14807 208 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 PROCP04070 461 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 KRT20P35900 424 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 XIAPP98170 497 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 PAFAH1B3Q15102 231 aaKnown RBP11.57□□□□□ -0.56
PTCH1-208ENST00000430669 TIGD5Q53EQ6 642 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 TCHHL1Q5QJ38 904 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-208ENST00000430669 BHLHB9Q6PI77 547 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 TRAPPC5Q8IUR0 188 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 TMEM192Q8IY95 271 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 MINDY3Q9H8M7 445 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 HMGXB4Q9UGU5 601 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 IPO13O94829 963 aaKnown RBP11.57□□□□□ -0.56
PTCH1-208ENST00000430669 SEC24DO94855 1032 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-208ENST00000430669 NFATC1O95644 943 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 COX4I1P13073 169 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 OGNP20774 298 aaKnown RBP11.57□□□□□ -0.56
PTCH1-208ENST00000430669 ELF3P78545 371 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-208ENST00000430669 GSTA3Q16772 222 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 TBCELQ5QJ74 424 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 CYP20A1Q6UW02 462 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 GPR141Q7Z602 305 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 TAC4Q86UU9 113 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 NPLOC4Q8TAT6 608 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 HMCESQ96FZ2 354 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 HOPXQ9BPY8 73 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-208ENST00000430669 CCDC3Q9BQI4 270 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 LRMDAQ9H2I8 198 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 IFNGR2P38484 337 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 TMED1Q13445 227 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 PTPRNQ16849 979 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 RHBDF2Q6PJF5 856 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 ZBTB49Q6ZSB9 765 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 TEKT5Q96M29 485 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 OSGEPL1Q9H4B0 414 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 ARMCX1Q9P291 453 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 MFHAS1Q9Y4C4 1052 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 ATG13O75143 517 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 DDX39BQ13838 428 aaKnown RBP11.56□□□□□ -0.56
PTCH1-208ENST00000430669 KCNJ11Q14654 390 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 LLGL2Q6P1M3 1020 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 SNX32Q86XE0 403 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 BEND7Q8N7W2 519 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-208ENST00000430669 LINGO1Q96FE5 620 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 C8orf48Q96LL4 319 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 FCRL5Q96RD9 977 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 RAI2Q9Y5P3 530 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 ATP6V1E1P36543 226 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 SPAM1P38567 509 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 ABL2P42684 1182 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 PLK1P53350 603 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 NUP107P57740 925 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 INTS11Q5TA45 600 aaKnown RBP11.56□□□□□ -0.56
PTCH1-208ENST00000430669 SLC51AQ86UW1 340 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 SETD9Q8NE22 299 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 ASZ1Q8WWH4 475 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 APOL4Q9BPW4 351 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 YJEFN3A6XGL0 299 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 ULK1O75385 1050 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 ATAD3BQ5T9A4 648 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 C16orf46Q6P387 395 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 TAS1R3Q7RTX0 852 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 PTGR2Q8N8N7 351 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-208ENST00000430669 C19orf60Q96EN9 201 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 INVSQ9Y283 1065 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 IGKV6-21A0A0C4DH24 114 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 GPR32O75388 356 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 CCL14Q16627 93 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 CERCAMQ5T4B2 595 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 GRIN3AQ8TCU5 1115 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 CD248Q9HCU0 757 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 ADPRHL2Q9NX46 363 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 NUDT4Q9NZJ9 180 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 MEI4A8MW99 385 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 SLC7A4O43246 635 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 NPHS1O60500 1241 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 S100A3P33764 101 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 MAGEA11P43364 429 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 RIPOR1Q6ZS17 1223 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 CHST9Q7L1S5 443 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 TNS4Q8IZW8 715 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 C1orf74Q96LT6 269 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 YIPF3Q9GZM5 350 aa11.56□□□□□ -0.56
PTCH1-208ENST00000430669 UPP1Q16831 310 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 LACTB2Q53H82 288 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-208ENST00000430669 HECTD2Q5U5R9 776 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 KIAA0930Q6ICG6 404 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-208ENST00000430669 MAB21L3Q8N8X9 362 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 LENG1Q96BZ8 264 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-208ENST00000430669 THAP11Q96EK4 314 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 NDNQ99608 321 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 SAC3D1A6NKF1 404 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 PRMT5O14744 637 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-208ENST00000430669 LDLRP01130 860 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 IZUMO2Q6UXV1 221 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 ZNF783Q6ZMS7 281 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 GDPD5Q8WTR4 605 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms