RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 TLR10Q9BXR5 811 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 SLC7A5P2Q9GIP4 190 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 GPR88Q9GZN0 384 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 KCNH6Q9H252 994 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 PLK3Q9H4B4 646 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 ZNF304Q9HCX3 659 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 TUFT1Q9NNX1 390 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 NGBQ9NPG2 151 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 CENPMQ9NSP4 180 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 SETD4Q9NVD3 440 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 DNAJC11Q9NVH1 559 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 TLK1Q9UKI8 766 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 FBXW2Q9UKT8 454 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 SHOC2Q9UQ13 582 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 TDRKHQ9Y2W6 561 aaKnown RBP5.05□□□□□ -1.6
GABPB1-204ENST00000396464 NAALAD2Q9Y3Q0 740 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 CHTOPQ9Y3Y2 248 aaKnown RBP5.05□□□□□ -1.6
GABPB1-204ENST00000396464 PCDHB2Q9Y5E7 798 aa5.05□□□□□ -1.6
GABPB1-204ENST00000396464 TBC1D3DA0A087WVF3 549 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 TBC1D3IA0A087WXS9 549 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 TBC1D3EA0A087X179 549 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 TBC1D3KA0A087X1G2 549 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 TBC1D3BA6NDS4 549 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 TBC1D3FA6NER0 549 aaPredicted RBP5.04□□□□□ -1.6
GABPB1-204ENST00000396464 TBC1D3LB9A6J9 549 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 M0QZQ0 153 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 PRDM1O75626 825 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 SRPRAP08240 638 aaKnown RBP5.04□□□□□ -1.6
GABPB1-204ENST00000396464 TBC1D3HP0C7X1 549 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 CCDC192P0DO97 292 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 ATP5JP18859 108 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 DRD1P21728 446 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 KCNA3P22001 575 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 MGAT1P26572 445 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 HOXA13P31271 388 aaPredicted RBP5.04□□□□□ -1.6
GABPB1-204ENST00000396464 RPS19P39019 145 aaKnown RBP5.04□□□□□ -1.6
GABPB1-204ENST00000396464 ADCY8P40145 1251 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 GSTM5P46439 218 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 PCP4P48539 62 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 ETV1P50549 477 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 DGKEP52429 567 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 METAP1P53582 386 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 MVDP53602 400 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 PRKAG1P54619 331 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 F2RL1P55085 397 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 ST8SIA6P61647 398 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 CCDC15Q0P6D6 951 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 IL24Q13007 206 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 PPIGQ13427 754 aaKnown RBP eCLIP5.04□□□□□ -1.6
GABPB1-204ENST00000396464 TOP3AQ13472 1001 aaPredicted RBP5.04□□□□□ -1.6
GABPB1-204ENST00000396464 GAMTQ14353 236 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 KARSQ15046 597 aaKnown RBP5.04□□□□□ -1.6
GABPB1-204ENST00000396464 TBC1D3GQ6DHY5 549 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 TBC1D3CQ6IPX1 549 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 NAPEPLDQ6IQ20 393 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 ZNF529Q6P280 563 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 TSSK4Q6SA08 328 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 SLC36A4Q6YBV0 504 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 CFAP77Q6ZQR2 320 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 TBC1D3Q8IZP1 549 aaPredicted RBP5.04□□□□□ -1.6
GABPB1-204ENST00000396464 FAM133AQ8N9E0 248 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 SLC17A8Q8NDX2 589 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 NLGN4YQ8NFZ3 816 aaPredicted RBP5.04□□□□□ -1.6
GABPB1-204ENST00000396464 MAFAQ8NHW3 353 aaPredicted RBP5.04□□□□□ -1.6
GABPB1-204ENST00000396464 CLEC4CQ8WTT0 213 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 PTPMT1Q8WUK0 201 aaPredicted RBP5.04□□□□□ -1.6
GABPB1-204ENST00000396464 GTF3C6Q969F1 213 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 PPP2R3CQ969Q6 453 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 RMDN2Q96LZ7 410 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 CAMK1GQ96NX5 476 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 C17orf80Q9BSJ5 609 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 MRI1Q9BV20 369 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 GLIS2Q9BZE0 524 aaPredicted RBP5.04□□□□□ -1.6
GABPB1-204ENST00000396464 IMPG2Q9BZV3 1241 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 CCSER1Q9C0I3 900 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 ZNF350Q9GZX5 532 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 CLSTN2Q9H4D0 955 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 YY1AP1Q9H869 796 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 USP29Q9HBJ7 922 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 C20orf141Q9NUB4 165 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 DNAJC17Q9NVM6 304 aaKnown RBP5.04□□□□□ -1.6
GABPB1-204ENST00000396464 TMOD3Q9NYL9 352 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 GDE1Q9NZC3 331 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 IL1RAPL1Q9NZN1 696 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 NCKIPSDQ9NZQ3 722 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 FBXO40Q9UH90 709 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 STRAPQ9Y3F4 350 aaKnown RBP5.04□□□□□ -1.6
GABPB1-204ENST00000396464 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.04□□□□□ -1.6
GABPB1-204ENST00000396464 TTC41PQ6P2S7 1318 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 WDR19Q8NEZ3 1342 aa5.04□□□□□ -1.6
GABPB1-204ENST00000396464 EDDM13A0A1B0GTR0 161 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 L7N2F9 121 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 SOCS6O14544 535 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 PPEF2O14830 753 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 TO15178 435 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 CTAGE5O15320 804 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 GPRIN2O60269 458 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 RECQL4O94761 1208 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 SLITRK3O94933 977 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 AGFG2O95081 481 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms