RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 CAPN8A6NHC0 703 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 CRTAMO95727 393 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 CRYMQ14894 314 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 SMAD1Q15797 465 aaKnown RBP10.98□□□□□ -0.65
BRCC3-204ENST00000369462 CNGA3Q16281 694 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 ANKRD20A4Q4UJ75 823 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 ESRP1Q6NXG1 681 aaKnown RBP10.98□□□□□ -0.65
BRCC3-204ENST00000369462 TRIM67Q6ZTA4 783 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 LYSMD3Q7Z3D4 306 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 TSPAN33Q86UF1 283 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 PTCD2Q8WV60 388 aaKnown RBP10.98□□□□□ -0.65
BRCC3-204ENST00000369462 ZBTB9Q96C00 473 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 MCCC1Q96RQ3 725 aaPredicted RBP10.98□□□□□ -0.65
BRCC3-204ENST00000369462 RANBP9Q96S59 729 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 B4GALT6Q9UBX8 382 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 ZNF711Q9Y462 761 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 MROH6A6NGR9 719 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 C2orf81A6NN90 581 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 CLDN7O95471 211 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 RPS14P62263 151 aaKnown RBP10.97□□□□□ -0.65
BRCC3-204ENST00000369462 CNTN1Q12860 1018 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 CASP8Q14790 479 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 TAF1AQ15573 450 aaPredicted RBP10.97□□□□□ -0.65
BRCC3-204ENST00000369462 TSTD2Q5T7W7 516 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 CRTC1Q6UUV9 634 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 ERN2Q76MJ5 926 aaKnown RBP10.97□□□□□ -0.65
BRCC3-204ENST00000369462 UNC5BQ8IZJ1 945 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 EID2BQ96D98 161 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 TRABDQ9H4I3 376 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 FBRSQ9HAH7 460 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 ZFYVE1Q9HBF4 777 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 C2orf42Q9NWW7 574 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 IL1RAPL1Q9NZN1 696 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 TCRBV9S1A1TA0A576 114 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 TCRBV21S2A2A0A5A6 115 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 CCL22O00626 93 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 PIAS1O75925 651 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 USP1O94782 785 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 ADH1BP00325 375 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 ADRB3P13945 408 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 C5AR1P21730 350 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 LHCGRP22888 699 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 NFKBIAP25963 317 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 DRD3P35462 400 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 P2RY2P41231 377 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 NEK3P51956 506 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 TMPRSS15P98073 1019 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 NLRP9Q7RTR0 991 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 AADATQ8N5Z0 425 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 PJA1Q8NG27 643 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 OR4K2Q8NGD2 314 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 OR13C4Q8NGS5 318 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 GSDMBQ8TAX9 411 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 GANCQ8TET4 914 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 SIPA1Q96FS4 1042 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 DNAJC1Q96KC8 554 aaKnown RBP10.97□□□□□ -0.65
BRCC3-204ENST00000369462 MRGPRX1Q96LB2 322 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 LYSMD1Q96S90 227 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 UHRF1Q96T88 793 aaPredicted RBP10.97□□□□□ -0.65
BRCC3-204ENST00000369462 MFSD1Q9H3U5 465 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 BPIFA1Q9NP55 256 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 ITM2BQ9Y287 266 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 SIT1Q9Y3P8 196 aa10.97□□□□□ -0.65
BRCC3-204ENST00000369462 ZCWPW2A0A1B0GU75 182 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 A0A1W2PP55 124 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 GOLGA8CPA6NN73 597 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 CHURC1-FNTBB4DL54 471 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 RNASEH2AO75792 299 aaKnown RBP10.96□□□□□ -0.65
BRCC3-204ENST00000369462 DNTTP04053 509 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 LPOP22079 712 aaPredicted RBP10.96□□□□□ -0.65
BRCC3-204ENST00000369462 PHBP35232 272 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 HMGCLP35914 325 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 LAMB3Q13751 1172 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 SKIDA1Q1XH10 827 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 STEAP4Q687X5 459 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 LRRC66Q68CR7 880 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 ERAP2Q6P179 960 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 TRMT10BQ6PF06 316 aaKnown RBP10.96□□□□□ -0.65
BRCC3-204ENST00000369462 SYT13Q7L8C5 426 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 TTC30BQ8N4P2 665 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 HDDC3Q8N4P3 179 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.96□□□□□ -0.65
BRCC3-204ENST00000369462 SRPK1Q96SB4 655 aaKnown RBP10.96□□□□□ -0.65
BRCC3-204ENST00000369462 OMDQ99983 421 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 HDAC8Q9BY41 377 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 MRM3Q9HC36 420 aaKnown RBP10.96□□□□□ -0.65
BRCC3-204ENST00000369462 PPANQ9NQ55 473 aaKnown RBP10.96□□□□□ -0.65
BRCC3-204ENST00000369462 TREX1Q9NSU2 369 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 SERGEFQ9UGK8 458 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 FAM169AQ9Y6X4 670 aa10.96□□□□□ -0.65
BRCC3-204ENST00000369462 NEMP1O14524 444 aa10.96□□□□□ -0.66
BRCC3-204ENST00000369462 STX7O15400 261 aaKnown RBP10.96□□□□□ -0.66
BRCC3-204ENST00000369462 ATG13O75143 517 aa10.96□□□□□ -0.66
BRCC3-204ENST00000369462 SPAG6O75602 509 aa10.96□□□□□ -0.66
BRCC3-204ENST00000369462 VAPBO95292 243 aa10.96□□□□□ -0.66
BRCC3-204ENST00000369462 DCNP07585 359 aaKnown RBP10.96□□□□□ -0.66
BRCC3-204ENST00000369462 NDUFV2P19404 249 aa10.96□□□□□ -0.66
BRCC3-204ENST00000369462 SIGLEC14Q08ET2 396 aa10.96□□□□□ -0.66
BRCC3-204ENST00000369462 ARHGEF7Q14155 803 aa10.96□□□□□ -0.66
BRCC3-204ENST00000369462 CDKN3Q16667 212 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms