RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 KRT81Q14533 505 aa19.17■□□□□ 0.66
CCDC28A-203ENST00000617445 ZSCAN23Q3MJ62 389 aa19.17■□□□□ 0.66
CCDC28A-203ENST00000617445 C6orf132Q5T0Z8 1188 aa19.17■□□□□ 0.66
CCDC28A-203ENST00000617445 ESRP1Q6NXG1 681 aaKnown RBP19.17■□□□□ 0.66
CCDC28A-203ENST00000617445 LIPIQ6XZB0 460 aa19.17■□□□□ 0.66
CCDC28A-203ENST00000617445 KDM7AQ6ZMT4 941 aa19.17■□□□□ 0.66
CCDC28A-203ENST00000617445 RBFAQ8N0V3 343 aa19.17■□□□□ 0.66
CCDC28A-203ENST00000617445 ATPAF2Q8N5M1 289 aa19.17■□□□□ 0.66
CCDC28A-203ENST00000617445 WDR48Q8TAF3 677 aa19.17■□□□□ 0.66
CCDC28A-203ENST00000617445 FAM71BQ8TC56 605 aa19.17■□□□□ 0.66
CCDC28A-203ENST00000617445 MAPK15Q8TD08 544 aa19.17■□□□□ 0.66
CCDC28A-203ENST00000617445 NUDCD1Q96RS6 583 aa19.17■□□□□ 0.66
CCDC28A-203ENST00000617445 CAAP1Q9H8G2 361 aa19.17■□□□□ 0.66
CCDC28A-203ENST00000617445 ETNK2Q9NVF9 386 aa19.17■□□□□ 0.66
CCDC28A-203ENST00000617445 UVRAGQ9P2Y5 699 aa19.17■□□□□ 0.66
CCDC28A-203ENST00000617445 SHROOM3Q8TF72 1996 aa19.17■□□□□ 0.66
CCDC28A-203ENST00000617445 CELSR3Q9NYQ7 3312 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 CPED1A4D0V7 1026 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 YY2O15391 372 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 CBFA2T2O43439 604 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 PEX11BO96011 259 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 CTSEP14091 401 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 TSHRP16473 764 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 CR2P20023 1033 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 KELP23276 732 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 CASP14P31944 242 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 ACTN2P35609 894 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 SEMG2Q02383 582 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 RALGDSQ12967 914 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 TRIM14Q14142 442 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 CDKN3Q16667 212 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 MARC1Q5VT66 337 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 C19orf48Q6RUI8 117 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 ENPP7Q6UWV6 458 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 TP53INP2Q8IXH6 220 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 LSMEM2Q8N112 164 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 ZNF564Q8TBZ8 553 aaPredicted RBP19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 HNRNPLLQ8WVV9 542 aaKnown RBP19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 BTBD6Q96KE9 485 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 WDR92Q96MX6 357 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 MGME1Q9BQP7 344 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 TCEAL2Q9H3H9 227 aaPredicted RBP19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 PNMA8BQ9ULN7 279 aaPredicted RBP19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 DOLKQ9UPQ8 538 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 DGKBQ9Y6T7 804 aa19.16■□□□□ 0.66
CCDC28A-203ENST00000617445 CACNB4O00305 520 aaPredicted RBP19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 PDE2AO00408 941 aaPredicted RBP19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 RRP8O43159 456 aaKnown RBP19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 TCEA3O75764 348 aa19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 RECQL5O94762 991 aaPredicted RBP19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 H2AFZP0C0S5 128 aa19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 SSR1P43307 286 aaKnown RBP19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 KIAA1024LP59773 190 aa19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 SRP54P61011 504 aaKnown RBP19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 C1orf61Q13536 156 aa19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 ALG11Q2TAA5 492 aa19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 COL28A1Q2UY09 1125 aa19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 TXNRD3NBQ6F5E7 133 aa19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 LRRC69Q6ZNQ3 347 aa19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 H2AFVQ71UI9 128 aa19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 EFL1Q7Z2Z2 1120 aaKnown RBP19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 GKN2Q86XP6 184 aa19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 HID1Q8IV36 788 aa19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 SNIP1Q8TAD8 396 aaKnown RBP19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 FGF11Q92914 225 aa19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 XPO4Q9C0E2 1151 aaKnown RBP19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 CLPBQ9H078 707 aa19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 HAUS2Q9NVX0 235 aa19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 KLQ9UEF7 1012 aa19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 RALYQ9UKM9 306 aaKnown RBP19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 PHTF1Q9UMS5 762 aa19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 NENFQ9UMX5 172 aa19.15■□□□□ 0.66
CCDC28A-203ENST00000617445 NBEAQ8NFP9 2946 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 TNFRSF10CO14798 259 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 TNFP01375 233 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 PRKCGP05129 697 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 PCCBP05166 539 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 MYF5P13349 255 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 KRT10P13645 584 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 CES1P23141 567 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 IL4RP24394 825 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 TRIM23P36406 574 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 EIF2S3P41091 472 aaKnown RBP19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 MMP13P45452 471 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 PDK2Q15119 407 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 SLC18A3Q16572 532 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 TSR1Q2NL82 804 aaKnown RBP19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 SPECC1LQ69YQ0 1117 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 GUSBP11Q6P575 273 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 PDZD3Q86UT5 571 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 MAP7D3Q8IWC1 876 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 SLC35F3Q8IY50 421 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 OR8K1Q8NGG5 319 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 CTNNBL1Q8WYA6 563 aaPredicted RBP19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 TSACCQ96A04 125 aaPredicted RBP19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 ZNHIT6Q9NWK9 470 aaKnown RBP19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 CTTNBP2NLQ9P2B4 639 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 PADI4Q9UM07 663 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 OR1A2Q9Y585 309 aa19.14■□□□□ 0.65
CCDC28A-203ENST00000617445 PCDHGC4Q9Y5F7 938 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms