RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 PGBD5Q8N414 524 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 TEX26Q8N6G2 289 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 MDM1Q8TC05 714 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 FATE1Q969F0 183 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 FAF2Q96CS3 445 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 NSMCE3Q96MG7 304 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 CHP1Q99653 195 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 APOOQ9BUR5 198 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 NHEJ1Q9H9Q4 299 aaPredicted RBP18.3■□□□□ 0.52
VCX3A-203ENST00000612369 HAUS2Q9NVX0 235 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 AMACRQ9UHK6 382 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 PHTF1Q9UMS5 762 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 PCDHGC4Q9Y5F7 938 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 LMO7DNF2Z398 122 aa18.29■□□□□ 0.52
VCX3A-203ENST00000612369 RECQL5O94762 991 aaPredicted RBP18.29■□□□□ 0.52
VCX3A-203ENST00000612369 PRKCGP05129 697 aa18.29■□□□□ 0.52
VCX3A-203ENST00000612369 CES1P23141 567 aa18.29■□□□□ 0.52
VCX3A-203ENST00000612369 GARSP41250 739 aaKnown RBP18.29■□□□□ 0.52
VCX3A-203ENST00000612369 ADKP55263 362 aaKnown RBP18.29■□□□□ 0.52
VCX3A-203ENST00000612369 TAS2R40P59535 323 aa18.29■□□□□ 0.52
VCX3A-203ENST00000612369 INSM1Q01101 510 aaPredicted RBP18.29■□□□□ 0.52
VCX3A-203ENST00000612369 GALNT2Q10471 571 aa18.29■□□□□ 0.52
VCX3A-203ENST00000612369 TARDBPQ13148 414 aaKnown RBP eCLIP18.29■□□□□ 0.52
VCX3A-203ENST00000612369 NFATC4Q14934 902 aa18.29■□□□□ 0.52
VCX3A-203ENST00000612369 IFI16Q16666 785 aaKnown RBP18.29■□□□□ 0.52
VCX3A-203ENST00000612369 PRRT3Q5FWE3 981 aa18.29■□□□□ 0.52
VCX3A-203ENST00000612369 NCBP2-AS2Q69YL0 99 aa18.29■□□□□ 0.52
VCX3A-203ENST00000612369 KDM7AQ6ZMT4 941 aa18.29■□□□□ 0.52
VCX3A-203ENST00000612369 FSTL5Q8N475 847 aaPredicted RBP18.29■□□□□ 0.52
VCX3A-203ENST00000612369 PCDH19Q8TAB3 1148 aa18.29■□□□□ 0.52
VCX3A-203ENST00000612369 SLC35G2Q8TBE7 412 aa18.29■□□□□ 0.52
VCX3A-203ENST00000612369 GLMNQ92990 594 aa18.29■□□□□ 0.52
VCX3A-203ENST00000612369 TSGA13Q96PP4 275 aa18.29■□□□□ 0.52
VCX3A-203ENST00000612369 NRSN2Q9GZP1 204 aa18.29■□□□□ 0.52
VCX3A-203ENST00000612369 NOD2Q9HC29 1040 aa18.29■□□□□ 0.52
VCX3A-203ENST00000612369 CLCA2Q9UQC9 943 aa18.29■□□□□ 0.52
VCX3A-203ENST00000612369 ANKRD11Q6UB99 2663 aaPredicted RBP18.28■□□□□ 0.52
VCX3A-203ENST00000612369 LY6G6EA0A0G2JKS1 128 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 MATN3O15232 486 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 MFSD11O43934 449 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 MTA2O94776 668 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 CPP00450 1065 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 ANXA6P08133 673 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 HOXC4P09017 264 aaPredicted RBP18.28■□□□□ 0.52
VCX3A-203ENST00000612369 MX2P20592 715 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 CCNCP24863 283 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 GJC1P36383 396 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 RPIAP49247 311 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 HK3P52790 923 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 SEMG2Q02383 582 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 CYP4F3Q08477 520 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 ELOCQ15369 112 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 SARM1Q6SZW1 724 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 VSIG1Q86XK7 387 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 RBFAQ8N0V3 343 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 NDUFAF2Q8N183 169 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 DCBLD1Q8N8Z6 715 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 PDCD6IPQ8WUM4 868 aaKnown RBP18.28■□□□□ 0.52
VCX3A-203ENST00000612369 MAML1Q92585 1016 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 NXPE2Q96DL1 559 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 ANP32EQ9BTT0 268 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 LRRC61Q9BV99 259 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 POLR1EQ9GZS1 481 aaKnown RBP18.28■□□□□ 0.52
VCX3A-203ENST00000612369 CAAP1Q9H8G2 361 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 B4GALT6Q9UBX8 382 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 INTUQ9ULD6 942 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 PNMA8BQ9ULN7 279 aaPredicted RBP18.28■□□□□ 0.52
VCX3A-203ENST00000612369 U3KQA8 63 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 SHROOM3Q8TF72 1996 aa18.28■□□□□ 0.52
VCX3A-203ENST00000612369 TTC24A2A3L6 582 aaPredicted RBP18.27■□□□□ 0.52
VCX3A-203ENST00000612369 ZNF487B1APH4 448 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 AKR1B15C9JRZ8 316 aaPredicted RBP18.27■□□□□ 0.52
VCX3A-203ENST00000612369 RASGRP1O95267 797 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 PCCBP05166 539 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 ALPIP09923 528 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 CYP2A6P11509 494 aaPredicted RBP18.27■□□□□ 0.52
VCX3A-203ENST00000612369 KRT10P13645 584 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 KELP23276 732 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 KDELR1P24390 212 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 VIPR1P32241 457 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 TRIM23P36406 574 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 KIAA1024LP59773 190 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 MAXP61244 160 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 TBX2Q13207 712 aaPredicted RBP18.27■□□□□ 0.52
VCX3A-203ENST00000612369 MESDQ14696 234 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 DEFB133Q30KQ1 61 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 C6orf132Q5T0Z8 1188 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 ZFYVE27Q5T4F4 411 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 ARMC12Q5T9G4 340 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 LVRNQ6Q4G3 990 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 ENPP7Q6UWV6 458 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 CPNE8Q86YQ8 564 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 SCG3Q8WXD2 468 aaKnown RBP18.27■□□□□ 0.52
VCX3A-203ENST00000612369 SCRN2Q96FV2 425 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 WDR92Q96MX6 357 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 BOCQ9BWV1 1114 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 TCEAL2Q9H3H9 227 aaPredicted RBP18.27■□□□□ 0.52
VCX3A-203ENST00000612369 NT5MQ9NPB1 228 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 PPIL1Q9Y3C6 166 aa18.27■□□□□ 0.52
VCX3A-203ENST00000612369 PKD1L2Q7Z442 2459 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms