RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 MCCD1P59942 119 aaPredicted RBP6.9□□□□□ -1.3
MUC1-221ENST00000610359 RNASE9P60153 205 aaKnown RBP6.9□□□□□ -1.3
MUC1-221ENST00000610359 KRTAP10-9P60411 292 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 CUL4BQ13620 913 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 TAF5Q15542 800 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 PLEKHN1Q494U1 663 aaPredicted RBP6.9□□□□□ -1.3
MUC1-221ENST00000610359 TMEM52BQ4KMG9 183 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 SNAP47Q5SQN1 464 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 KRT39Q6A163 491 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 GDF7Q7Z4P5 450 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 NAGSQ8N159 534 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 CISD2Q8N5K1 135 aaKnown RBP6.9□□□□□ -1.3
MUC1-221ENST00000610359 GALNT6Q8NCL4 622 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 CCDC150Q8NCX0 1101 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 OR56A4Q8NGH8 313 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 PNPLA2Q96AD5 504 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 DHX58Q96C10 678 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 RUFY1Q96T51 708 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 C1QTNF7Q9BXJ2 289 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 ANLNQ9NQW6 1124 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 RAB20Q9NX57 234 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 COX16Q9P0S2 106 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 SLC12A6Q9UHW9 1150 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 FRMD4BQ9Y2L6 1034 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 SNX10Q9Y5X0 201 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 ST14Q9Y5Y6 855 aa6.9□□□□□ -1.3
MUC1-221ENST00000610359 JMJD1CQ15652 2540 aa6.9□□□□□ -1.31
MUC1-221ENST00000610359 PVALEFA0A1B0GWK0 134 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 ZSCAN5CA6NGD5 496 aaPredicted RBP6.89□□□□□ -1.31
MUC1-221ENST00000610359 ARGFXA6NJG6 315 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 KRIT1O00522 736 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 PDXKO00764 312 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 MAPK13O15264 365 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 INPP4BO15327 924 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 DPM1O60762 260 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 PAGE1O75459 146 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 CEACAM4O75871 244 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 RECKO95980 971 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 FUCA1P04066 466 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 PCCBP05166 539 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 SNRPB2P08579 225 aaKnown RBP6.89□□□□□ -1.31
MUC1-221ENST00000610359 PDIA4P13667 645 aaKnown RBP6.89□□□□□ -1.31
MUC1-221ENST00000610359 CCNB1P14635 433 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 BRD2P25440 801 aaKnown RBP6.89□□□□□ -1.31
MUC1-221ENST00000610359 ITGA3P26006 1051 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 VARSP26640 1264 aaKnown RBP6.89□□□□□ -1.31
MUC1-221ENST00000610359 AK4P27144 223 aaPredicted RBP6.89□□□□□ -1.31
MUC1-221ENST00000610359 CCR1P32246 355 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 KIAA1024LP59773 190 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 AMPD3Q01432 767 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 CUL2Q13617 745 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 CNGA2Q16280 664 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 CRB2Q5IJ48 1285 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 C6orf15Q6UXA7 325 aaPredicted RBP6.89□□□□□ -1.31
MUC1-221ENST00000610359 ZNF517Q6ZMY9 492 aaPredicted RBP6.89□□□□□ -1.31
MUC1-221ENST00000610359 INTS8Q75QN2 995 aaKnown RBP6.89□□□□□ -1.31
MUC1-221ENST00000610359 LYSMD3Q7Z3D4 306 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 SETD3Q86TU7 594 aaPredicted RBP6.89□□□□□ -1.31
MUC1-221ENST00000610359 TTC7BQ86TV6 843 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 SLC47A2Q86VL8 602 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 ZNF761Q86XN6 746 aaPredicted RBP6.89□□□□□ -1.31
MUC1-221ENST00000610359 PLPP6Q8IY26 295 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 ZNF295-AS1Q8N0V1 137 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 PELI3Q8N2H9 469 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 FBXL13Q8NEE6 735 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 ATL2Q8NHH9 583 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 KIAA1524Q8TCG1 905 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 PTCD2Q8WV60 388 aaKnown RBP6.89□□□□□ -1.31
MUC1-221ENST00000610359 ARHGEF26Q96DR7 871 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 DPYSL5Q9BPU6 564 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 SPON2Q9BUD6 331 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 NUDT9Q9BW91 350 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 LGR4Q9BXB1 951 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 TRIM8Q9BZR9 551 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 RUBCNLQ9H714 662 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 FAM204AQ9H8W3 233 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 POPDC2Q9HBU9 364 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 SIDT1Q9NXL6 827 aaKnown RBP6.89□□□□□ -1.31
MUC1-221ENST00000610359 MPP6Q9NZW5 540 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 TAAR2Q9P1P5 351 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 ZNF212Q9UDV6 495 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 KIAA1257Q9ULG3 409 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 NTNG1Q9Y2I2 539 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 ZNF451Q9Y4E5 1061 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 PCDHGA6Q9Y5G7 932 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 ANKRD12Q6UB98 2062 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 ABCA4P78363 2273 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 NBEAL1Q6ZS30 2694 aa6.89□□□□□ -1.31
MUC1-221ENST00000610359 VPS13CQ709C8 3753 aa6.88□□□□□ -1.31
MUC1-221ENST00000610359 NSD1Q96L73 2696 aaPredicted RBP6.88□□□□□ -1.31
MUC1-221ENST00000610359 COL6A5A8TX70 2615 aa6.88□□□□□ -1.31
MUC1-221ENST00000610359 AKAP6Q13023 2319 aa6.88□□□□□ -1.31
MUC1-221ENST00000610359 NCOA6Q14686 2063 aaPredicted RBP6.88□□□□□ -1.31
MUC1-221ENST00000610359 DRGXA6NNA5 263 aa6.88□□□□□ -1.31
MUC1-221ENST00000610359 TNFRSF10CO14798 259 aa6.88□□□□□ -1.31
MUC1-221ENST00000610359 POLR1CO15160 346 aaPredicted RBP6.88□□□□□ -1.31
MUC1-221ENST00000610359 ZW10O43264 779 aa6.88□□□□□ -1.31
MUC1-221ENST00000610359 LRCH4O75427 683 aa6.88□□□□□ -1.31
MUC1-221ENST00000610359 SLC2A3P11169 496 aa6.88□□□□□ -1.31
MUC1-221ENST00000610359 GTF2H1P32780 548 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms