RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 SCRN2Q96FV2 425 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 AGAP3Q96P47 875 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 KLF6Q99612 283 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 SLC25A51Q9H1U9 297 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 IL21RQ9HBE5 538 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 LZTFL1Q9NQ48 299 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 DNPEPQ9ULA0 475 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 CA5BQ9Y2D0 317 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 FNDC3AQ9Y2H6 1198 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 PPIL1Q9Y3C6 166 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 PI4KAP42356 2102 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 A0A1B0GTQ1 180 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 H7C0C1 242 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 KCNK3O14649 394 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 DDX3YO15523 660 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 PRKCGP05129 697 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 CEACAM1P13688 526 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 VIPR1P32241 457 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 CD86P42081 329 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 ATP5OP48047 213 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 RXRGP48443 463 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 CLDN2P57739 230 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 NIPAL4Q0D2K0 466 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 ARHGEF7Q14155 803 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 PTK2BQ14289 1009 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 LRRC14Q15048 493 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 INAVAQ3KP66 663 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 PTAR1Q7Z6K3 402 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 CDKL3Q8IVW4 592 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 HTR3CQ8WXA8 447 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 CENPTQ96BT3 561 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 BMFQ96LC9 184 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 TEKT5Q96M29 485 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 QKIQ96PU8 341 aaKnown RBP eCLIP17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 TDRD1Q9BXT4 1180 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 ADGRE3Q9BY15 652 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 PCDH9Q9HC56 1237 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 B4GALT6Q9UBX8 382 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 PACSIN2Q9UNF0 486 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 PPP2R2CQ9Y2T4 447 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 CEP250Q9BV73 2442 aa17.36■□□□□ 0.37
SHKBP1-212ENST00000596163 PSMD11O00231 422 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 RAD51BO15315 384 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 FLRT2O43155 660 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 PCDHGA12O60330 932 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 FZD6O60353 706 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 STK10O94804 968 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 CD59P13987 128 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 PTPN3P26045 913 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 YPEL5P62699 121 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 NOMO1Q15155 1222 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 RPS6KA1Q15418 735 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 SLC14A2Q15849 920 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 CCDC70Q6NSX1 233 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 LIPIQ6XZB0 460 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 SPATS2Q86XZ4 545 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 TRIM58Q8NG06 486 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 OR13H1Q8NG92 308 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 ACTL9Q8TC94 416 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 SETD7Q8WTS6 366 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 PIH1D2Q8WWB5 315 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 IFT43Q96FT9 208 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 IMP4Q96G21 291 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 MCCC1Q96RQ3 725 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 GLOD4Q9HC38 313 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 KLHL8Q9P2G9 620 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 TRHDEQ9UKU6 1024 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 CHKBQ9Y259 395 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 PCDH15Q96QU1 1955 aa17.35■□□□□ 0.37
SHKBP1-212ENST00000596163 POM121BA6NF01 834 aa17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 KCNK5O95279 499 aa17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 ITGAVP06756 1048 aa17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 TNNT3P45378 269 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 NOVA1P51513 510 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 THOP1P52888 689 aa17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 EIF3EP60228 445 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 SKOR1P84550 965 aa17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 OTUD4Q01804 1114 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 SEMG2Q02383 582 aa17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 RALGDSQ12967 914 aa17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 ZNF211Q13398 564 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 ACOX1Q15067 660 aa17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 CACNA1EQ15878 2313 aa17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 PPM1JQ5JR12 505 aa17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 SEL1L2Q5TEA6 688 aa17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 DBX2Q6ZNG2 339 aa17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 B4GALNT4Q76KP1 1039 aa17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 PID1Q7Z2X4 250 aa17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 PIP4P1Q86T03 277 aa17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 NAXDQ8IW45 347 aa17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 TP53I13Q8NBR0 393 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 CEP41Q9BYV8 373 aa17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 COQ6Q9Y2Z9 468 aa17.34■□□□□ 0.37
SHKBP1-212ENST00000596163 A0A0J9YYE9 177 aa17.33■□□□□ 0.36
SHKBP1-212ENST00000596163 A8MX80 341 aa17.33■□□□□ 0.36
SHKBP1-212ENST00000596163 ZSCAN12O43309 604 aa17.33■□□□□ 0.36
SHKBP1-212ENST00000596163 SH3BP5O60239 455 aa17.33■□□□□ 0.36
SHKBP1-212ENST00000596163 RECQL5O94762 991 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-212ENST00000596163 HEXIM1O94992 359 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-212ENST00000596163 TRBC1P01850 177 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms