RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 LIN7AO14910 233 aaPredicted RBP13.71□□□□□ -0.21
NDEL1-204ENST00000578172 NDUFS3O75489 264 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 ALDH1A2O94788 518 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 HGFP14210 728 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 ATP5F1P24539 256 aaPredicted RBP13.71□□□□□ -0.21
NDEL1-204ENST00000578172 GALK1P51570 392 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 USP46P62068 366 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 TRIM32Q13049 653 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 SPOUT1Q5T280 376 aaKnown RBP13.71□□□□□ -0.21
NDEL1-204ENST00000578172 STEAP4Q687X5 459 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 GDF6Q6KF10 455 aaPredicted RBP13.71□□□□□ -0.21
NDEL1-204ENST00000578172 TRIM74Q86UV6 250 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 TRIM73Q86UV7 250 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 OR7D4Q8NG98 312 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 RP9Q8TA86 221 aaKnown RBP13.71□□□□□ -0.21
NDEL1-204ENST00000578172 MTFMTQ96DP5 389 aaKnown RBP13.71□□□□□ -0.21
NDEL1-204ENST00000578172 TBCDQ9BTW9 1192 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 UBE2OQ9C0C9 1292 aaKnown RBP13.71□□□□□ -0.21
NDEL1-204ENST00000578172 CCDC90BQ9GZT6 254 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 HCSTQ9UBK5 93 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 KCNH4Q9UQ05 1017 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 IQCF5A8MTL0 148 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 NCAM2O15394 837 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 FESP07332 822 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 NFKBIAP25963 317 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 FAM171A1Q5VUB5 890 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 AGMOQ6ZNB7 445 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 LILRA2Q8N149 483 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 LPCAT1Q8NF37 534 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 OR10Q1Q8NGQ4 319 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 CANT1Q8WVQ1 401 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 TMIGD2Q96BF3 282 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 ZNF512Q96ME7 567 aaPredicted RBP13.71□□□□□ -0.21
NDEL1-204ENST00000578172 ADNPQ9H2P0 1102 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 UBAP1Q9NZ09 502 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 CD274Q9NZQ7 290 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 WARS2Q9UGM6 360 aaKnown RBP13.71□□□□□ -0.21
NDEL1-204ENST00000578172 VWA7Q9Y334 891 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 TCAF1Q9Y4C2 921 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 LTBP3Q9NS15 1303 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 BTN3A1O00481 513 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 ELNP15502 786 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 RPL17P18621 184 aaKnown RBP13.71□□□□□ -0.21
NDEL1-204ENST00000578172 CRABP2P29373 138 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 KPNA2P52292 529 aaKnown RBP13.71□□□□□ -0.21
NDEL1-204ENST00000578172 CREB5Q02930 508 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 INSCQ1MX18 579 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 GALNT15Q8N3T1 639 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 PTPN18Q99952 460 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 PRDM5Q9NQX1 630 aaPredicted RBP13.71□□□□□ -0.21
NDEL1-204ENST00000578172 PCDHGC4Q9Y5F7 938 aa13.71□□□□□ -0.21
NDEL1-204ENST00000578172 TRPC5OSA6NMA1 111 aa13.71□□□□□ -0.22
NDEL1-204ENST00000578172 FFAR3O14843 346 aa13.71□□□□□ -0.22
NDEL1-204ENST00000578172 GPR42O15529 346 aa13.71□□□□□ -0.22
NDEL1-204ENST00000578172 CCNT2O60583 730 aaKnown RBP13.71□□□□□ -0.22
NDEL1-204ENST00000578172 SNX2O60749 519 aa13.71□□□□□ -0.22
NDEL1-204ENST00000578172 ZNF23P17027 643 aa13.71□□□□□ -0.22
NDEL1-204ENST00000578172 MRPS6P82932 125 aaKnown RBP13.71□□□□□ -0.22
NDEL1-204ENST00000578172 C16orf72Q14CZ0 275 aa13.71□□□□□ -0.22
NDEL1-204ENST00000578172 POLD3Q15054 466 aaPredicted RBP13.71□□□□□ -0.22
NDEL1-204ENST00000578172 TIGD2Q4W5G0 525 aa13.71□□□□□ -0.22
NDEL1-204ENST00000578172 CDYL2Q8N8U2 506 aa13.71□□□□□ -0.22
NDEL1-204ENST00000578172 APBB2Q92870 758 aa13.71□□□□□ -0.22
NDEL1-204ENST00000578172 GPR22Q99680 433 aa13.71□□□□□ -0.22
NDEL1-204ENST00000578172 EFHD1Q9BUP0 239 aa13.71□□□□□ -0.22
NDEL1-204ENST00000578172 F2P00734 622 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 LTA4HP09960 611 aaKnown RBP13.7□□□□□ -0.22
NDEL1-204ENST00000578172 WARSP23381 471 aaKnown RBP13.7□□□□□ -0.22
NDEL1-204ENST00000578172 STX5Q13190 355 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 NFYCQ13952 458 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 REP15Q6BDI9 236 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 CLVS1Q8IUQ0 354 aaPredicted RBP13.7□□□□□ -0.22
NDEL1-204ENST00000578172 MAGEE2Q8TD90 523 aaPredicted RBP13.7□□□□□ -0.22
NDEL1-204ENST00000578172 ZNF419Q96HQ0 510 aaPredicted RBP13.7□□□□□ -0.22
NDEL1-204ENST00000578172 NR1H4Q96RI1 486 aaPredicted RBP13.7□□□□□ -0.22
NDEL1-204ENST00000578172 EGFL8Q99944 293 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 EML4Q9HC35 981 aaKnown RBP13.7□□□□□ -0.22
NDEL1-204ENST00000578172 SORCS3Q9UPU3 1222 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 MAGEB16A2A368 324 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 GNGT2O14610 69 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 FOXA1P55317 472 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 CYP51A1Q16850 503 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 DHFR2Q86XF0 187 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 ZNF280BQ86YH2 543 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 ARL10Q8N8L6 244 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 NCLNQ969V3 563 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 TMEM74Q96NL1 305 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 TM6SF2Q9BZW4 377 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.7□□□□□ -0.227e-7■■□□□ 13.7
NDEL1-204ENST00000578172 CIDEBQ9UHD4 219 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 CDH9Q9ULB4 789 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 HS3ST4Q9Y661 456 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 A0A1W2PQ67 120 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 RAMP2O60895 175 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 IPO13O94829 963 aaKnown RBP13.7□□□□□ -0.22
NDEL1-204ENST00000578172 GLP2RO95838 553 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 SNRPB2P08579 225 aaKnown RBP13.7□□□□□ -0.22
NDEL1-204ENST00000578172 GSSP48637 474 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 CTXN3Q4LDR2 81 aa13.7□□□□□ -0.22
NDEL1-204ENST00000578172 AAGABQ6PD74 315 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms