RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 ANKRD27Q96NW4 1050 aa19.59■□□□□ 0.73
CDH5-204ENST00000563425 CINPQ9BW66 212 aaPredicted RBP19.59■□□□□ 0.73
CDH5-204ENST00000563425 SUDS3Q9H7L9 328 aaPredicted RBP19.59■□□□□ 0.73
CDH5-204ENST00000563425 CYP4F11Q9HBI6 524 aa19.59■□□□□ 0.73
CDH5-204ENST00000563425 NCKIPSDQ9NZQ3 722 aa19.59■□□□□ 0.73
CDH5-204ENST00000563425 YIPF1Q9Y548 306 aa19.59■□□□□ 0.73
CDH5-204ENST00000563425 DENND4CQ5VZ89 1909 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.58■□□□□ 0.72
CDH5-204ENST00000563425 A0A1B0GVM2 712 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 CCDC162PA2VCL2 907 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 TCAF2A6NFQ2 919 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 KRT36O76013 467 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 RHOCP08134 193 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 RBP1P09455 135 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 SLC26A3P40879 764 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 ALDH1A3P47895 512 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 DSG1Q02413 1049 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 ZNF177Q13360 481 aaPredicted RBP19.58■□□□□ 0.72
CDH5-204ENST00000563425 PTPRCAPQ14761 206 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 ACAP2Q15057 778 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 RCN1Q15293 331 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 ADGRF1Q5T601 910 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 FAM45BPQ6NSW5 357 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 TRIM67Q6ZTA4 783 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.58■□□□□ 0.72
CDH5-204ENST00000563425 FAM45AQ8TCE6 357 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 CCDC126Q96EE4 140 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 CNDP1Q96KN2 507 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 NSMCE3Q96MG7 304 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 KLF16Q9BXK1 252 aaPredicted RBP19.58■□□□□ 0.72
CDH5-204ENST00000563425 RNF38Q9H0F5 515 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 WDR55Q9H6Y2 383 aaPredicted RBP19.58■□□□□ 0.72
CDH5-204ENST00000563425 SLC7A8Q9UHI5 535 aa19.58■□□□□ 0.72
CDH5-204ENST00000563425 AGO1Q9UL18 857 aaKnown RBP19.58■□□□□ 0.72
CDH5-204ENST00000563425 A0A088AWK7 358 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 GOLGA8QA0A0J9YX86 632 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 GOLGA8OA6NCC3 632 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 GOLGA8NF8WBI6 632 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 CD3EAPO15446 510 aaKnown RBP19.57■□□□□ 0.72
CDH5-204ENST00000563425 CIB2O75838 187 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 CR2P20023 1033 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 RGRP47804 291 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 SLC25A3Q00325 362 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 TLE2Q04725 743 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 TRMT5Q32P41 509 aaKnown RBP19.57■□□□□ 0.72
CDH5-204ENST00000563425 LSM12Q3MHD2 195 aaKnown RBP19.57■□□□□ 0.72
CDH5-204ENST00000563425 CNKSR3Q6P9H4 555 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 RNF135Q8IUD6 432 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 KDM1BQ8NB78 822 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 OR13C4Q8NGS5 318 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 ANKRD49Q8WVL7 239 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 SHCBP1LQ9BZQ2 653 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 CORO1CQ9ULV4 474 aaPredicted RBP19.57■□□□□ 0.72
CDH5-204ENST00000563425 TBC1D30Q9Y2I9 924 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 NEMP2A6NFY4 417 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 BUD23O43709 281 aaKnown RBP19.57■□□□□ 0.72
CDH5-204ENST00000563425 PIRTP0C851 137 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 COX4I1P13073 169 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 GCKP35557 465 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 PTDSS1P48651 473 aaKnown RBP19.57■□□□□ 0.72
CDH5-204ENST00000563425 NSUN2Q08J23 767 aaKnown RBP eCLIP19.57■□□□□ 0.72
CDH5-204ENST00000563425 PLD1Q13393 1074 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 TAF12Q16514 161 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 MRNIPQ6NTE8 343 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 TMEM207Q6UWW9 146 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 ACAD11Q709F0 780 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 SPNS2Q8IVW8 549 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 STMN2Q93045 179 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 WBP2Q969T9 261 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 TOX2Q96NM4 488 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 CCDC28BQ9BUN5 200 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 NUF2Q9BZD4 464 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 SAGE1Q9NXZ1 904 aa19.57■□□□□ 0.72
CDH5-204ENST00000563425 C2orf78A6NCI8 922 aa19.56■□□□□ 0.72
CDH5-204ENST00000563425 A8MT66 165 aa19.56■□□□□ 0.72
CDH5-204ENST00000563425 NEMP1O14524 444 aa19.56■□□□□ 0.72
CDH5-204ENST00000563425 INSIG1O15503 277 aa19.56■□□□□ 0.72
CDH5-204ENST00000563425 IRF1P10914 325 aa19.56■□□□□ 0.72
CDH5-204ENST00000563425 HOXB8P17481 243 aaPredicted RBP19.56■□□□□ 0.72
CDH5-204ENST00000563425 KCNA5P22460 613 aa19.56■□□□□ 0.72
CDH5-204ENST00000563425 FDXRP22570 491 aa19.56■□□□□ 0.72
CDH5-204ENST00000563425 EPHA3P29320 983 aa19.56■□□□□ 0.72
CDH5-204ENST00000563425 C6orf163Q5TEZ5 329 aa19.56■□□□□ 0.72
CDH5-204ENST00000563425 ZNF549Q6P9A3 640 aa19.56■□□□□ 0.72
CDH5-204ENST00000563425 RIPOR1Q6ZS17 1223 aa19.56■□□□□ 0.72
CDH5-204ENST00000563425 VWCEQ96DN2 955 aa19.56■□□□□ 0.72
CDH5-204ENST00000563425 PANX3Q96QZ0 392 aa19.56■□□□□ 0.72
CDH5-204ENST00000563425 OSBPL1AQ9BXW6 950 aa19.56■□□□□ 0.72
CDH5-204ENST00000563425 RNF208Q9H0X6 261 aa19.56■□□□□ 0.72
CDH5-204ENST00000563425 STOML1Q9UBI4 398 aa19.56■□□□□ 0.72
CDH5-204ENST00000563425 CRYL1Q9Y2S2 319 aa19.56■□□□□ 0.72
CDH5-204ENST00000563425 ARIH1Q9Y4X5 557 aaPredicted RBP19.56■□□□□ 0.72
CDH5-204ENST00000563425 TSPAN3O60637 253 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 IPO13O94829 963 aaKnown RBP19.55■□□□□ 0.72
CDH5-204ENST00000563425 CCL5P13501 91 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 OGNP20774 298 aaKnown RBP19.55■□□□□ 0.72
CDH5-204ENST00000563425 CES1P23141 567 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 PPP3CCP48454 512 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 SCNN1BP51168 640 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 ACTR3P61158 418 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms