RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 PKN3Q6P5Z2 889 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 TRIM67Q6ZTA4 783 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 SLC24A5Q71RS6 500 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 LIMS2Q7Z4I7 341 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 HERC6Q8IVU3 1022 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 SPATA6LQ8N4H0 392 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 TXNDC5Q8NBS9 432 aaKnown RBP11.55□□□□□ -0.56
DDB1-224ENST00000545894 LPGAT1Q92604 370 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 FAR2Q96K12 515 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 UHRF1Q96T88 793 aaPredicted RBP11.55□□□□□ -0.56
DDB1-224ENST00000545894 MRPL57Q9BQC6 102 aaKnown RBP11.55□□□□□ -0.56
DDB1-224ENST00000545894 EFHD1Q9BUP0 239 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 NXF3Q9H4D5 531 aaKnown RBP11.55□□□□□ -0.56
DDB1-224ENST00000545894 POMKQ9H5K3 350 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 TRPC7Q9HCX4 862 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 HACD3Q9P035 362 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 IPO11Q9UI26 975 aaKnown RBP11.55□□□□□ -0.56
DDB1-224ENST00000545894 FBXW11Q9UKB1 542 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 SNX13Q9Y5W8 968 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 RALGAPA2Q2PPJ7 1873 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 A0A0U1RQF3 1178 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 TCRBV3S1A0A5B6 114 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 MEIS3P2A8K0S8 358 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 PSMD12O00232 456 aaPredicted RBP11.54□□□□□ -0.56
DDB1-224ENST00000545894 FYNP06241 537 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 FGFR3P22607 806 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 ATP5F1P24539 256 aaPredicted RBP11.54□□□□□ -0.56
DDB1-224ENST00000545894 TKTL1P51854 596 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 EMP3P54852 163 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 COG7P83436 770 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 CTBP1Q13363 440 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 FASTKQ14296 549 aaKnown RBP11.54□□□□□ -0.56
DDB1-224ENST00000545894 MTX3Q5HYI7 312 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 CNSTQ6PJW8 725 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 LPCAT2Q7L5N7 544 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 MRPL10Q7Z7H8 261 aaKnown RBP11.54□□□□□ -0.56
DDB1-224ENST00000545894 MFSD6LQ8IWD5 586 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 DENND6AQ8IWF6 608 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 AFAP1L2Q8N4X5 818 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 HMGCLL1Q8TB92 370 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 SPPL2BQ8TCT7 592 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 PBXIP1Q96AQ6 731 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 SLCO4A1Q96BD0 722 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 RMND5BQ96G75 393 aaPredicted RBP11.54□□□□□ -0.56
DDB1-224ENST00000545894 CAAP1Q9H8G2 361 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 SPAG4Q9NPE6 437 aa11.54□□□□□ -0.56
DDB1-224ENST00000545894 DNAAF2Q9NVR5 837 aaKnown RBP11.54□□□□□ -0.56
DDB1-224ENST00000545894 CHCHD3Q9NX63 227 aaKnown RBP11.54□□□□□ -0.56
DDB1-224ENST00000545894 A0A087X1B8 175 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 SMIM28A0A1B0GU29 152 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 ABHD14A-ACY1A0A1B0GW23 586 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 PRORSD1PA6NEY8 169 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 FBP2O00757 339 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 NRP1O14786 923 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 UBDO15205 165 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 ZNF623O75123 536 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 HNRNPLP14866 589 aaKnown RBP eCLIP11.53□□□□□ -0.56
DDB1-224ENST00000545894 WARSP23381 471 aaKnown RBP11.53□□□□□ -0.56
DDB1-224ENST00000545894 AKAP5P24588 427 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 TUBA4AP68366 448 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 SULT2A1Q06520 285 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 RALGDSQ12967 914 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 PSMD5Q16401 504 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 ARL13BQ3SXY8 428 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 SV2CQ496J9 727 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 AGKQ53H12 422 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 FAM43BQ6ZT52 329 aaPredicted RBP11.53□□□□□ -0.56
DDB1-224ENST00000545894 CLEC20AQ6ZU45 233 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 OSTM1Q86WC4 334 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 MYO1HQ8N1T3 1032 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 HM13Q8TCT9 377 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 TRPC4APQ8TEL6 797 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 LPPQ93052 612 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 TMIGD2Q96BF3 282 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 SGF29Q96ES7 293 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 ELMO2Q96JJ3 720 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 ZNF512Q96ME7 567 aaPredicted RBP11.53□□□□□ -0.56
DDB1-224ENST00000545894 SLC29A1Q99808 456 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 UNKQ9C0B0 810 aaKnown RBP11.53□□□□□ -0.56
DDB1-224ENST00000545894 OSBPL2Q9H1P3 480 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 OLAHQ9NV23 265 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 FIS1Q9Y3D6 152 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.53□□□□□ -0.56
DDB1-224ENST00000545894 ZNF638Q14966 1978 aaKnown RBP11.53□□□□□ -0.56
DDB1-224ENST00000545894 XPOTO43592 962 aaKnown RBP11.53□□□□□ -0.56
DDB1-224ENST00000545894 SNRPB2P08579 225 aaKnown RBP11.53□□□□□ -0.56
DDB1-224ENST00000545894 WDR5P61964 334 aaKnown RBP11.53□□□□□ -0.56
DDB1-224ENST00000545894 DEFB103AP81534 67 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 SAMD4BQ5PRF9 694 aaKnown RBP11.53□□□□□ -0.56
DDB1-224ENST00000545894 PSRC1Q6PGN9 363 aaPredicted RBP11.53□□□□□ -0.56
DDB1-224ENST00000545894 PAQR9Q6ZVX9 377 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 OTOP3Q7RTS5 596 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 ZNF598Q86UK7 904 aaKnown RBP11.53□□□□□ -0.56
DDB1-224ENST00000545894 KLHDC8BQ8IXV7 354 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 CRIPAKQ8N1N5 446 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 HEXDCQ8WVB3 486 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 BIRC8Q96P09 236 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 CIB1Q99828 191 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 TBL1YQ9BQ87 522 aa11.53□□□□□ -0.56
DDB1-224ENST00000545894 MED10Q9BTT4 135 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms