RNA–Protein interactions for RNA: ENST00000532872.5

RPS3-218, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-218ENST00000532872 LIPIQ6XZB0 460 aa12.89□□□□□ -0.35
RPS3-218ENST00000532872 POLNQ7Z5Q5 900 aa12.89□□□□□ -0.35
RPS3-218ENST00000532872 HID1Q8IV36 788 aa12.89□□□□□ -0.35
RPS3-218ENST00000532872 TP53INP2Q8IXH6 220 aa12.89□□□□□ -0.35
RPS3-218ENST00000532872 WDR48Q8TAF3 677 aa12.89□□□□□ -0.35
RPS3-218ENST00000532872 SYN2Q92777 582 aaPredicted RBP12.89□□□□□ -0.35
RPS3-218ENST00000532872 TSACCQ96A04 125 aaPredicted RBP12.89□□□□□ -0.35
RPS3-218ENST00000532872 ZNF578Q96N58 590 aaPredicted RBP12.89□□□□□ -0.35
RPS3-218ENST00000532872 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.89□□□□□ -0.35
RPS3-218ENST00000532872 POLR1BQ9H9Y6 1135 aa12.89□□□□□ -0.35
RPS3-218ENST00000532872 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.89□□□□□ -0.35
RPS3-218ENST00000532872 KLQ9UEF7 1012 aa12.89□□□□□ -0.35
RPS3-218ENST00000532872 OR1A2Q9Y585 309 aa12.89□□□□□ -0.35
RPS3-218ENST00000532872 FASNP49327 2511 aaKnown RBP12.88□□□□□ -0.35
RPS3-218ENST00000532872 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.88□□□□□ -0.35
RPS3-218ENST00000532872 SYCE3A1L190 88 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 RECQL5O94762 991 aaPredicted RBP12.88□□□□□ -0.35
RPS3-218ENST00000532872 CELA2BP08218 269 aaPredicted RBP12.88□□□□□ -0.35
RPS3-218ENST00000532872 RARAP10276 462 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 TCF4P15884 667 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 HSPA9P38646 679 aaKnown RBP12.88□□□□□ -0.35
RPS3-218ENST00000532872 PBX1P40424 430 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 PCBP4P57723 403 aaKnown RBP12.88□□□□□ -0.35
RPS3-218ENST00000532872 SRP54P61011 504 aaKnown RBP12.88□□□□□ -0.35
RPS3-218ENST00000532872 FANCCQ00597 558 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 SLC10A7Q0GE19 358 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 COL9A2Q14055 689 aaPredicted RBP12.88□□□□□ -0.35
RPS3-218ENST00000532872 ZNF235Q14590 738 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 PERM1Q5SV97 790 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 CRTC1Q6UUV9 634 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 RBM44Q6ZP01 1051 aaKnown RBP12.88□□□□□ -0.35
RPS3-218ENST00000532872 DPPA4Q7L190 304 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 RD3Q7Z3Z2 195 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 LUZP1Q86V48 1076 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 GKN2Q86XP6 184 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 ARL10Q8N8L6 244 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 NIPA2Q8N8Q9 360 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 ZNF248Q8NDW4 579 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 PCDH19Q8TAB3 1148 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 TEKT4Q8WW24 435 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 SPOCK2Q92563 424 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 HSPH1Q92598 858 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 IQCDQ96DY2 449 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 WDR92Q96MX6 357 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 CSPG4P5Q96PW8 444 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 THAP2Q9H0W7 228 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 CBX8Q9HC52 389 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 PADI4Q9UM07 663 aa12.88□□□□□ -0.35
RPS3-218ENST00000532872 A0A1W2PQ67 120 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 CACNB4O00305 520 aaPredicted RBP12.87□□□□□ -0.35
RPS3-218ENST00000532872 HTRA2O43464 458 aaPredicted RBP12.87□□□□□ -0.35
RPS3-218ENST00000532872 SOCS5O75159 536 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 PEX11BO96011 259 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 TNFP01375 233 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 SERPING1P05155 500 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 AMPD1P23109 780 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 KELP23276 732 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 SERPINB6P35237 376 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 UBASH3AP57075 661 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 KIAA1024LP59773 190 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 ERVPABLB-1P60509 514 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 ZBED6P86452 979 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 TLE3Q04726 772 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 CCDC173Q0VFZ6 552 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 IGF2-ASQ6U949 168 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 SPACA3Q8IXA5 215 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 BBS5Q8N3I7 341 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 ATPAF2Q8N5M1 289 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 PLA2G15Q8NCC3 412 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 NSMCE1Q8WV22 266 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 PDXPQ96GD0 296 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 HIC2Q96JB3 615 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 NSMCE3Q96MG7 304 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 NUDCD1Q96RS6 583 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 LGMNQ99538 433 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 CCDC3Q9BQI4 270 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 NUP85Q9BW27 656 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 PRORYQ9H606 182 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 ETNK2Q9NVF9 386 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 GULP1Q9UBP9 304 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 IP6K2Q9UHH9 426 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 ANAPC7Q9UJX3 599 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 ENTPD2Q9Y5L3 495 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 DGKBQ9Y6T7 804 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 LRP4O75096 1905 aa12.87□□□□□ -0.35
RPS3-218ENST00000532872 COL27A1Q8IZC6 1860 aaPredicted RBP12.87□□□□□ -0.35
RPS3-218ENST00000532872 BAHCC1Q9P281 2608 aa12.86□□□□□ -0.35
RPS3-218ENST00000532872 MAFKO60675 156 aa12.86□□□□□ -0.35
RPS3-218ENST00000532872 HOXC4P09017 264 aaPredicted RBP12.86□□□□□ -0.35
RPS3-218ENST00000532872 CR2P20023 1033 aa12.86□□□□□ -0.35
RPS3-218ENST00000532872 NFKBIAP25963 317 aa12.86□□□□□ -0.35
RPS3-218ENST00000532872 TRIM23P36406 574 aa12.86□□□□□ -0.35
RPS3-218ENST00000532872 CDH6P55285 790 aa12.86□□□□□ -0.35
RPS3-218ENST00000532872 SLC25A11Q02978 314 aaKnown RBP12.86□□□□□ -0.35
RPS3-218ENST00000532872 SPIDRQ14159 915 aa12.86□□□□□ -0.35
RPS3-218ENST00000532872 TCEA2Q15560 299 aa12.86□□□□□ -0.35
RPS3-218ENST00000532872 C3orf38Q5JPI3 329 aa12.86□□□□□ -0.35
RPS3-218ENST00000532872 RALGPS1Q5JS13 557 aa12.86□□□□□ -0.35
RPS3-218ENST00000532872 TXNRD3NBQ6F5E7 133 aa12.86□□□□□ -0.35
RPS3-218ENST00000532872 KYQ8NBH2 561 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms