RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 UBE2Q2LH0YL09 131 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 SEC14L5O43304 696 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 NKX2-2O95096 273 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 LCKP06239 509 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 CCDC175P0C221 793 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 ST6GAL1P15907 406 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 ZNF182P17025 639 aaPredicted RBP4.66□□□□□ -1.66
VPS13A-211ENST00000484581 CPT2P23786 658 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 RYKP34925 604 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 CLCNKBP51801 687 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 CACNA2D1P54289 1103 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 GALCP54803 685 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 MRPS5P82675 430 aaKnown RBP4.66□□□□□ -1.66
VPS13A-211ENST00000484581 NHLH1Q02575 133 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 RUNX2Q13950 521 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 KRT24Q2M2I5 525 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 CRY2Q49AN0 593 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 AWAT1Q58HT5 328 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 KRBOX4Q5JUW0 171 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 LRIG3Q6UXM1 1119 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 DNAJB7Q7Z6W7 309 aaPredicted RBP4.66□□□□□ -1.66
VPS13A-211ENST00000484581 RNF168Q8IYW5 571 aaPredicted RBP4.66□□□□□ -1.66
VPS13A-211ENST00000484581 CADM3Q8N126 398 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 OR6J1Q8NGC5 347 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 PIGKQ92643 395 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 TMCO6Q96DC7 493 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 TMEM68Q96MH6 324 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 PAFAH2Q99487 392 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 HGH1Q9BTY7 390 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 HRH4Q9H3N8 390 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 FOXJ2Q9P0K8 574 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 SLC17A6Q9P2U8 582 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 RASAL2Q9UJF2 1139 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 BTBD3Q9Y2F9 522 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 ZFP37Q9Y6Q3 630 aaPredicted RBP4.66□□□□□ -1.66
VPS13A-211ENST00000484581 FAM237AA0A1B0GTK4 181 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 TCRBV21S2A2A0A5A6 115 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 BICDL2A1A5D9 508 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 ADAMDEC1O15204 470 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 AVILO75366 819 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 PSMD10O75832 226 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 JTBO76095 146 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 NFATC1O95644 943 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 BAG2O95816 211 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 CHRM5P08912 532 aaPredicted RBP4.65□□□□□ -1.67
VPS13A-211ENST00000484581 CD63P08962 238 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 ACTN1P12814 892 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 IL7RP16871 459 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 CTPS1P17812 591 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 TRIM21P19474 475 aaKnown RBP4.65□□□□□ -1.67
VPS13A-211ENST00000484581 TFEBP19484 476 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 ITGAXP20702 1163 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 EPHB2P29323 1055 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 ATP5DP30049 168 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 CIITAP33076 1130 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 ABCG1P45844 678 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 GRIK3Q13003 919 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 MTA1Q13330 715 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 GRAPQ13588 217 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 SNTB1Q13884 538 aaKnown RBP4.65□□□□□ -1.67
VPS13A-211ENST00000484581 TCTN1Q2MV58 587 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 C6orf141Q5SZD1 244 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 AKNAD1Q5T1N1 836 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 DCLRE1AQ6PJP8 1040 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 LCTLQ6UWM7 567 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 CLEC17AQ6ZS10 378 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 MFSD6Q6ZSS7 791 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 CYB5R4Q7L1T6 521 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 GRASPQ7Z6J2 395 aaPredicted RBP4.65□□□□□ -1.67
VPS13A-211ENST00000484581 TRIM74Q86UV6 250 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 TRIM73Q86UV7 250 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 IGFN1Q86VF2 1251 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 CCDC25Q86WR0 208 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 IQCA1Q86XH1 822 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 RASAL3Q86YV0 1011 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 TMC8Q8IU68 726 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 ZNF713Q8N859 430 aaPredicted RBP4.65□□□□□ -1.67
VPS13A-211ENST00000484581 Q8NFD4 153 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 GOT1L1Q8NHS2 421 aaPredicted RBP4.65□□□□□ -1.67
VPS13A-211ENST00000484581 LRRC59Q96AG4 307 aaKnown RBP4.65□□□□□ -1.67
VPS13A-211ENST00000484581 REPS1Q96D71 796 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 RAB3IPQ96QF0 476 aaPredicted RBP4.65□□□□□ -1.67
VPS13A-211ENST00000484581 SIN3AQ96ST3 1273 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 SEPT5Q99719 369 aaPredicted RBP4.65□□□□□ -1.67
VPS13A-211ENST00000484581 IFIH1Q9BYX4 1025 aaKnown RBP4.65□□□□□ -1.67
VPS13A-211ENST00000484581 SLC29A3Q9BZD2 475 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 C2orf40Q9H1Z8 148 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 RETREG1Q9H6L5 497 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 XAB2Q9HCS7 855 aaKnown RBP4.65□□□□□ -1.67
VPS13A-211ENST00000484581 ARHGEF38Q9NXL2 777 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 WDR35Q9P2L0 1181 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 EXO1Q9UQ84 846 aaKnown RBP4.65□□□□□ -1.67
VPS13A-211ENST00000484581 MAU2Q9Y6X3 613 aa4.65□□□□□ -1.67
VPS13A-211ENST00000484581 CYP2D7A0A087X1C5 515 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 LOC102723996A0A087X1L8 192 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 LRRC72A6NJI9 287 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 HSPB2A8KAH6 182 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 RNMTO43148 476 aaKnown RBP4.64□□□□□ -1.67
VPS13A-211ENST00000484581 SLC7A4O43246 635 aa4.64□□□□□ -1.67
VPS13A-211ENST00000484581 NEURL1O76050 574 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms