RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 IGSF6O95976 241 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 NMBRP28336 390 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 AFF1P51825 1210 aaKnown RBP11.36□□□□□ -0.59
SMPD4-218ENST00000482171 RPS24P62847 133 aaKnown RBP11.36□□□□□ -0.59
SMPD4-218ENST00000482171 ITGADQ13349 1161 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 AAGABQ6PD74 315 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 SCIMPQ6UWF3 145 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 ZDHHC14Q8IZN3 488 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 SERAC1Q96JX3 654 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 ASB8Q9H765 288 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 WDR41Q9HAD4 459 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 PNPOQ9NVS9 261 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 SPG21Q9NZD8 308 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 PCDHGB4Q9UN71 923 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 CNTRLQ7Z7A1 2325 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 ARVCFO00192 962 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 IRAK2O43187 625 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 MAP3K13O43283 966 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 TACR2P21452 398 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 MZF1P28698 734 aaPredicted RBP11.36□□□□□ -0.59
SMPD4-218ENST00000482171 GRIA4P48058 902 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 CLK1P49759 484 aaKnown RBP11.36□□□□□ -0.59
SMPD4-218ENST00000482171 AIF1P55008 147 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 AQP4P55087 323 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 ABCE1P61221 599 aaKnown RBP11.36□□□□□ -0.59
SMPD4-218ENST00000482171 PEX6Q13608 980 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 NR6A1Q15406 480 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 ADGRD1Q6QNK2 874 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 HEATR4Q86WZ0 1026 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 ACTR8Q9H981 624 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 CREBZFQ9NS37 354 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 PNMA8BQ9ULN7 279 aaPredicted RBP11.36□□□□□ -0.59
SMPD4-218ENST00000482171 ZBTB42B2RXF5 422 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 TBC1D4O60343 1298 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 PROZP22891 400 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 EPHA3P29320 983 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 AMIGO2Q86SJ2 522 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 PQLC1Q8N2U9 271 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 ARL14EPQ8N8R7 260 aaPredicted RBP11.36□□□□□ -0.59
SMPD4-218ENST00000482171 TBATAQ96M53 351 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 CERS4Q9HA82 394 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 PREBQ9HCU5 417 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 ZMYM5Q9UJ78 669 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 SORCS3Q9UPU3 1222 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 BCORQ6W2J9 1755 aa11.36□□□□□ -0.59
SMPD4-218ENST00000482171 MAST2Q6P0Q8 1798 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 MAGEC1O60732 1142 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 ATP5BP06576 529 aaKnown RBP11.35□□□□□ -0.59
SMPD4-218ENST00000482171 SLC10A3P09131 477 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 ZNF7P17097 686 aaPredicted RBP11.35□□□□□ -0.59
SMPD4-218ENST00000482171 ZNF252P-AS1Q0IIN9 211 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 HSPA14Q0VDF9 509 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 RALGPS1Q5JS13 557 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 ANKS6Q68DC2 871 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 C17orf99Q6UX52 265 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 DENND6AQ8IWF6 608 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 PQLC3Q8N755 202 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 IRGQQ8WZA9 623 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 CYP2S1Q96SQ9 504 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 A0A087WXM4 84 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 CXorf49A8MYA2 514 aaPredicted RBP11.35□□□□□ -0.59
SMPD4-218ENST00000482171 TLL1O43897 1013 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 RAB10P61026 200 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 ZNF460Q14592 562 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 TCEA2Q15560 299 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 TLDC1Q6P9B6 456 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 POTEHQ6S545 545 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 DET1Q7L5Y6 550 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 SERINC5Q86VE9 423 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 PTGR2Q8N8N7 351 aaPredicted RBP11.35□□□□□ -0.59
SMPD4-218ENST00000482171 SEPHS2Q99611 448 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 THUMPD3Q9BV44 507 aaKnown RBP11.35□□□□□ -0.59
SMPD4-218ENST00000482171 GBA3Q9H227 469 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 CCSER2Q9H7U1 834 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 ZNF358Q9NW07 568 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 CFAP97Q9P2B7 532 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 RSL24D1Q9UHA3 163 aaKnown RBP11.35□□□□□ -0.59
SMPD4-218ENST00000482171 MRPS23Q9Y3D9 190 aaKnown RBP11.35□□□□□ -0.59
SMPD4-218ENST00000482171 TRAV19A0A0A6YYK7 116 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 PTGESO14684 152 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 DLGAP3O95886 979 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 CHRNA1P02708 482 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 ADH1AP07327 375 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 TYMPP19971 482 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 CDH5P33151 784 aaPredicted RBP11.35□□□□□ -0.59
SMPD4-218ENST00000482171 DMPKQ09013 629 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 GRM3Q14832 879 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 PKN3Q6P5Z2 889 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 DNAJC14Q6Y2X3 702 aaPredicted RBP11.35□□□□□ -0.59
SMPD4-218ENST00000482171 SUSD3Q96L08 255 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 ZIC5Q96T25 663 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 BBS2Q9BXC9 721 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 NDEL1Q9GZM8 345 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 FAM124BQ9H5Z6 455 aaPredicted RBP11.35□□□□□ -0.59
SMPD4-218ENST00000482171 RUBCNLQ9H714 662 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 SLC7A8Q9UHI5 535 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 PLLPQ9Y342 182 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 CEP290O15078 2479 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 SYN3O14994 580 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 LTA4HP09960 611 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms