RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 FGF1P05230 155 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 RARAP10276 462 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 PYGMP11217 842 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 IDEP14735 1019 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 GSPT1P15170 499 aaKnown RBP6.61□□□□□ -1.35
HDAC3-206ENST00000471968 CD19P15391 556 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 SLC11A2P49281 568 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 RBPJQ06330 500 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 TRIM29Q14134 588 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 IRF4Q15306 451 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 FOXD4L6Q3SYB3 417 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-206ENST00000471968 B3GNTL1Q67FW5 361 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-206ENST00000471968 NADSYN1Q6IA69 706 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 FOXD4L3Q6VB84 417 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-206ENST00000471968 ARHGAP18Q8N392 663 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 GALNT16Q8N428 558 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 ZBTB2Q8N680 514 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 MYCT1Q8N699 235 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 C12orf29Q8N999 325 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 TP53I13Q8NBR0 393 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-206ENST00000471968 OR2A12Q8NGT7 310 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 GOT1L1Q8NHS2 421 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-206ENST00000471968 OR1E3Q8WZA6 343 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 NCSTNQ92542 709 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 LARP4BQ92615 738 aaKnown RBP6.61□□□□□ -1.35
HDAC3-206ENST00000471968 SDCCAG3Q96C92 435 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 LCORQ96JN0 433 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-206ENST00000471968 CCDC114Q96M63 670 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 WDR92Q96MX6 357 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 IRX2Q9BZI1 471 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-206ENST00000471968 ZHX3Q9H4I2 956 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 C1GALT1Q9NS00 363 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 IL36AQ9UHA7 158 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 OR1A2Q9Y585 309 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 USP3Q9Y6I4 520 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 DGKBQ9Y6T7 804 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 INTS1Q8N201 2190 aaKnown RBP6.61□□□□□ -1.35
HDAC3-206ENST00000471968 TTC24A2A3L6 582 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-206ENST00000471968 GOLGA6L3A6NEY3 463 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 CPLX1O14810 134 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 KLHL41O60662 606 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 TIAF1O95411 115 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 CST3P01034 146 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-206ENST00000471968 XBP1P17861 261 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 SCP2P22307 547 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 KRT2P35908 639 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 IL11RAQ14626 422 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 INPP5AQ14642 412 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 POSTNQ15063 836 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 PRKD1Q15139 912 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-206ENST00000471968 DUOXA2Q1HG44 320 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 Q5PR19 223 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 WDR74Q6RFH5 385 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-206ENST00000471968 CHD1LQ86WJ1 897 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 VWA5B2Q8N398 1253 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 SH2D3CQ8N5H7 860 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 CLEC1AQ8NC01 280 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 TAF4BQ92750 862 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 TNFRSF25Q93038 417 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 CCDC127Q96BQ5 260 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 PWWP2AQ96N64 755 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 SLC38A3Q99624 504 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 C1QTNF7Q9BXJ2 289 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 NUCKS1Q9H1E3 243 aaKnown RBP6.6□□□□□ -1.35
HDAC3-206ENST00000471968 SUDS3Q9H7L9 328 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-206ENST00000471968 PNPLA8Q9NP80 782 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 NDFIP2Q9NV92 336 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 SEC14L3Q9UDX4 400 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 MEMO1Q9Y316 297 aa6.6□□□□□ -1.35
HDAC3-206ENST00000471968 MYH11P35749 1972 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 LRP4O75096 1905 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 FAM237BA0A1B0GVD1 139 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 CCDC78A2IDD5 438 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 TRIM64A6NGJ6 449 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 TRIM64BA6NI03 449 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 SPTLC2O15270 562 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 SLC26A4O43511 780 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 MMP20O60882 483 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 TM7SF2O76062 418 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 CLSTN1O94985 981 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 BRAFP15056 766 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 TIMP2P16035 220 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 L1CAMP32004 1257 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 DDIT3P35638 169 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 MAPK9P45984 424 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 ARCN1P48444 511 aaKnown RBP6.59□□□□□ -1.35
HDAC3-206ENST00000471968 SEPHS1P49903 392 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 GTF2BQ00403 316 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 TLR1Q15399 786 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 ZRSR1Q15695 479 aaKnown RBP6.59□□□□□ -1.35
HDAC3-206ENST00000471968 KLHL40Q2TBA0 621 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 MS4A13Q5J8X5 152 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 RNF20Q5VTR2 975 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 SCARA5Q6ZMJ2 495 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 TRAPPC11Q7Z392 1133 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 PPP1R3BQ86XI6 285 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 CDC20BQ86Y33 519 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 ENDOVQ8N8Q3 282 aaKnown RBP6.59□□□□□ -1.35
HDAC3-206ENST00000471968 COG1Q8WTW3 980 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 RNF139Q8WU17 664 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms