RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 SHBQ15464 509 aa12.97□□□□□ -0.33
COL5A1-206ENST00000465877 INAVAQ3KP66 663 aa12.97□□□□□ -0.33
COL5A1-206ENST00000465877 PRAMEF14Q5SWL7 426 aa12.97□□□□□ -0.33
COL5A1-206ENST00000465877 ARMC12Q5T9G4 340 aa12.97□□□□□ -0.33
COL5A1-206ENST00000465877 KDM7AQ6ZMT4 941 aa12.97□□□□□ -0.33
COL5A1-206ENST00000465877 PEX26Q7Z412 305 aa12.97□□□□□ -0.33
COL5A1-206ENST00000465877 NT5DC3Q86UY8 548 aa12.97□□□□□ -0.33
COL5A1-206ENST00000465877 RCOR2Q8IZ40 523 aa12.97□□□□□ -0.33
COL5A1-206ENST00000465877 BAHD1Q8TBE0 780 aaPredicted RBP12.97□□□□□ -0.33
COL5A1-206ENST00000465877 ARRDC2Q8TBH0 407 aa12.97□□□□□ -0.33
COL5A1-206ENST00000465877 BMFQ96LC9 184 aa12.97□□□□□ -0.33
COL5A1-206ENST00000465877 CAMK1GQ96NX5 476 aa12.97□□□□□ -0.33
COL5A1-206ENST00000465877 TDRD1Q9BXT4 1180 aaKnown RBP12.97□□□□□ -0.33
COL5A1-206ENST00000465877 TSGA10Q9BZW7 698 aa12.97□□□□□ -0.33
COL5A1-206ENST00000465877 BRD8Q9H0E9 1235 aa12.97□□□□□ -0.33
COL5A1-206ENST00000465877 SEPT10Q9P0V9 454 aa12.97□□□□□ -0.33
COL5A1-206ENST00000465877 SAE1Q9UBE0 346 aaPredicted RBP12.97□□□□□ -0.33
COL5A1-206ENST00000465877 B4GALT6Q9UBX8 382 aa12.97□□□□□ -0.33
COL5A1-206ENST00000465877 BTBD3Q9Y2F9 522 aa12.97□□□□□ -0.33
COL5A1-206ENST00000465877 HS3ST3A1Q9Y663 406 aa12.97□□□□□ -0.33
COL5A1-206ENST00000465877 PCNX2A6NKB5 2137 aa12.97□□□□□ -0.33
COL5A1-206ENST00000465877 PTPRBP23467 1997 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 GOLGA6L3A6NEY3 463 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 APOC4-APOC2K7ER74 178 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 FZD6O60353 706 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 FTCDO95954 541 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 JCHAINP01591 159 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 APOC2P02655 101 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 CA4P22748 312 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 NFKBIAP25963 317 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 VIPR1P32241 457 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 GRK6P43250 576 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 RWDD2BP57060 319 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 COPS2P61201 443 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 IHHQ14623 411 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 AGERQ15109 404 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 CNGA3Q16281 694 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 BBS12Q6ZW61 710 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 USP45Q70EL2 814 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 B4GALNT4Q76KP1 1039 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 BZW1Q7L1Q6 419 aaKnown RBP12.96□□□□□ -0.33
COL5A1-206ENST00000465877 GATAD2AQ86YP4 633 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 LRRC8AQ8IWT6 810 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 CNTD1Q8N815 330 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 SETD7Q8WTS6 366 aaKnown RBP12.96□□□□□ -0.33
COL5A1-206ENST00000465877 TFB1MQ8WVM0 346 aaKnown RBP12.96□□□□□ -0.33
COL5A1-206ENST00000465877 ALG3Q92685 438 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 P3H4Q92791 437 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 CENPTQ96BT3 561 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 QKIQ96PU8 341 aaKnown RBP eCLIP12.96□□□□□ -0.33
COL5A1-206ENST00000465877 MCCC1Q96RQ3 725 aaPredicted RBP12.96□□□□□ -0.33
COL5A1-206ENST00000465877 HERPUD2Q9BSE4 406 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 MBNL1Q9NR56 388 aaKnown RBP12.96□□□□□ -0.33
COL5A1-206ENST00000465877 AMFRQ9UKV5 643 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 PCOLCE2Q9UKZ9 415 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 PHTF1Q9UMS5 762 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 PACSIN2Q9UNF0 486 aaPredicted RBP12.96□□□□□ -0.33
COL5A1-206ENST00000465877 CEP295Q9C0D2 2601 aa12.96□□□□□ -0.33
COL5A1-206ENST00000465877 CFAP69A5D8W1 941 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 NPIPB15A6NHN6 443 aaPredicted RBP12.95□□□□□ -0.34
COL5A1-206ENST00000465877 MIF4GDA9UHW6 222 aaKnown RBP12.95□□□□□ -0.34
COL5A1-206ENST00000465877 KRT86O43790 486 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 LZTS3O60299 673 aaPredicted RBP12.95□□□□□ -0.34
COL5A1-206ENST00000465877 SDC3O75056 442 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 CBFA2T3O75081 653 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 MMP2P08253 660 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 PDHA1P08559 390 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 ADRB1P08588 477 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 CYP2A6P11509 494 aaPredicted RBP12.95□□□□□ -0.34
COL5A1-206ENST00000465877 GM2AP17900 193 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 LHCGRP22888 699 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 CES1P23141 567 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 CD86P42081 329 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 RXRGP48443 463 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 PEX5P50542 639 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 PFN3P60673 137 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 NIPAL4Q0D2K0 466 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 PDE1CQ14123 709 aaPredicted RBP12.95□□□□□ -0.34
COL5A1-206ENST00000465877 SUZ12Q15022 739 aaKnown RBP12.95□□□□□ -0.34
COL5A1-206ENST00000465877 LRRC14Q15048 493 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 TPRG1LQ5T0D9 272 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 FAM182AQ5T1J6 154 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 LIPIQ6XZB0 460 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 DBX2Q6ZNG2 339 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 Q6ZSR6 202 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 PARGQ86W56 976 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 UBL4BQ8N7F7 174 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 SAP25Q8TEE9 199 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 AGAP3Q96P47 875 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 HEMGNQ9BXL5 484 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 OSBPL8Q9BZF1 889 aa12.95□□□□□ -0.34
COL5A1-206ENST00000465877 ARID1BQ8NFD5 2236 aaPredicted RBP12.94□□□□□ -0.34
COL5A1-206ENST00000465877 ZFC3H1O60293 1989 aaKnown RBP12.94□□□□□ -0.34
COL5A1-206ENST00000465877 A0A0J9YYE9 177 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 SPTY2D1-AS1A0A0U1RR47 76 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 SPAARA0A1B0GVQ0 90 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 CAPN8A6NHC0 703 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 A8MX80 341 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 NRDCO43847 1150 aa12.94□□□□□ -0.34
COL5A1-206ENST00000465877 RECQL5O94762 991 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms