RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 A0A0U1RQK1 487 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 RNF103-CHMP3A0A140T963 221 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 SERTM2A0A1B0GWG4 89 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 ZNF320A2RRD8 509 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 NT5C1B-RDH14C9J2C7 533 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 H0Y858 1186 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 TRIM77I1YAP6 450 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 FZD9O00144 591 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 RNF103O00237 685 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 MAP2K7O14733 419 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 DAPK3O43293 454 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 NUDT21O43809 227 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 GPRIN2O60269 458 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 PQBP1O60828 265 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 PSIP1O75475 530 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 CRCPO75575 148 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 ERAL1O75616 437 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 CTAG2O75638 210 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 SCAF4O95104 1147 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 RASAL1O95294 804 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 PTBP3O95758 552 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 PNPP00491 289 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 KNG1P01042 644 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 SNRPB2P08579 225 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 ZCCHC18P0CG32 403 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 MYBL1P10243 752 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 CCDC130P13994 396 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 SLC9A1P19634 815 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 PDCP20941 246 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 CHMP24386 653 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 PTX3P26022 381 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 ADSLP30566 484 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 SLC15A1P46059 708 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 SLC9A3P48764 834 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 TMED10P49755 219 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 RGS19P49795 217 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 CCNG1P51959 295 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 SLC7A2P52569 658 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 SUCLG1P53597 346 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 AIF1P55008 147 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 NLRP11P59045 1033 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 GNAI1P63096 354 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 CREB5Q02930 508 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 MAP4K2Q12851 820 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 EFR3AQ14156 821 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 FHL2Q14192 279 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 USP10Q14694 798 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 STARD3Q14849 445 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 MORF4L2Q15014 288 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 PON2Q15165 354 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 DHCR24Q15392 516 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 P3H1Q32P28 736 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 GTDC1Q4AE62 458 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 MIIPQ5JXC2 388 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 C6orf183Q5T699 404 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 CACHD1Q5VU97 1274 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 NAA35Q5VZE5 725 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 PRMT9Q6P2P2 845 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 DARS2Q6PI48 645 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 C4orf22Q6V702 233 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 Q6ZUG5 572 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 CYP4V2Q6ZWL3 525 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 MARK2Q7KZI7 788 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 TAF8Q7Z7C8 310 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 GLRX5Q86SX6 157 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 ADAMTSL2Q86TH1 951 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 KBTBD6Q86V97 674 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 LRRTM4Q86VH4 590 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 CCDC105Q8IYK2 499 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 THNSL1Q8IYQ7 743 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 FBXL16Q8N461 479 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 MRPL43Q8N983 215 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 FAM133AQ8N9E0 248 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 DTX3Q8N9I9 347 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 RNF169Q8NCN4 708 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 ICA1LQ8NDH6 482 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 SIMC1Q8NDZ2 872 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 SRFBP1Q8NEF9 429 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 DDHD1Q8NEL9 900 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 CREB3L4Q8TEY5 395 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 RHBDF1Q96CC6 855 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 MAGED4Q96JG8 741 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 TMX3Q96JJ7 454 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 FAM227BQ96M60 508 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 NSMCE2Q96MF7 247 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 RIPOR3Q96MK2 946 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 OLFM3Q96PB7 478 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 VPS35Q96QK1 796 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 HAPLN3Q96S86 360 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 PLIN2Q99541 437 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 KCNJ15Q99712 375 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 PRRX2Q99811 253 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 SF3B5Q9BWJ5 86 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 CELF4Q9BZC1 486 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 UNKQ9C0B0 810 aaKnown RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 SLC26A1Q9H2B4 701 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 IKZF4Q9H2S9 585 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 SMOC1Q9H4F8 434 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 EPS8L2Q9H6S3 715 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 FAM204AQ9H8W3 233 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms