RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 ACOX1Q15067 660 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 WSCD2Q2TBF2 565 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 ARMC12Q5T9G4 340 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 FAXCQ5TGI0 409 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 UNQ6494/PRO21346Q6UXR6 183 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 LIPIQ6XZB0 460 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 BZW1Q7L1Q6 419 aaKnown RBP11.26□□□□□ -0.61
RFFL-204ENST00000414419 KANSL1Q7Z3B3 1105 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 GAS2L3Q86XJ1 694 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 CCDC13Q8IYE1 715 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 SLC25A45Q8N413 288 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 OR4C6Q8NH72 309 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 ATL2Q8NHH9 583 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 RNF25Q96BH1 459 aaPredicted RBP11.26□□□□□ -0.61
RFFL-204ENST00000414419 HDAC11Q96DB2 347 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 DUSP23Q9BVJ7 150 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 SLC13A1Q9BZW2 595 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 GPR27Q9NS67 375 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 UCKL1Q9NWZ5 548 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 TOR4AQ9NXH8 423 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 KCTD5Q9NXV2 234 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 NLGN3Q9NZ94 848 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 DTLQ9NZJ0 730 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 SPASTQ9UBP0 616 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.26□□□□□ -0.61
RFFL-204ENST00000414419 HYOU1Q9Y4L1 999 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 PCDHGA1Q9Y5H4 931 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 ALG6Q9Y672 507 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 EPN1Q9Y6I3 576 aaPredicted RBP11.26□□□□□ -0.61
RFFL-204ENST00000414419 PLXNB3Q9ULL4 1909 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 MYLKQ15746 1914 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 A0A0A6YYK5 440 aaPredicted RBP11.25□□□□□ -0.61
RFFL-204ENST00000414419 SOWAHDA6NJG2 315 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 GOLGA6L6A8MZA4 724 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 C1QTNF9BB2RNN3 333 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 PPP1R12AO14974 1030 aaPredicted RBP11.25□□□□□ -0.61
RFFL-204ENST00000414419 SCAMP1O15126 338 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 AQP9O43315 295 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 PSTPIP1O43586 416 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 SIGLEC6O43699 453 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 RECQL5O94762 991 aaPredicted RBP11.25□□□□□ -0.61
RFFL-204ENST00000414419 NDUFA10O95299 355 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 PGLSO95336 258 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 PCCBP05166 539 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 C1QTNF9P0C862 333 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 VIPR1P32241 457 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 BLKP51451 505 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 DYNLT1P63172 113 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 PPARDQ03181 441 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 SLC10A2Q12908 348 aaPredicted RBP11.25□□□□□ -0.61
RFFL-204ENST00000414419 TRAF2Q12933 501 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 RALGDSQ12967 914 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 ILKQ13418 452 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 TFDP2Q14188 446 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 INPP5AQ14642 412 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 AGERQ15109 404 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 PDK1Q15118 436 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 DENND2CQ68D51 928 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 DHRS13Q6UX07 377 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 MACC1Q6ZN28 852 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 USP45Q70EL2 814 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 TMPRSS7Q7RTY8 843 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 DAAM2Q86T65 1068 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 TPCN2Q8NHX9 752 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 LMX1AQ8TE12 382 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 LRRN4Q8WUT4 740 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 SPOCK2Q92563 424 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 MAML1Q92585 1016 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 FATE1Q969F0 183 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 CALR3Q96L12 384 aaKnown RBP11.25□□□□□ -0.61
RFFL-204ENST00000414419 IL12RB2Q99665 862 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 APOOQ9BUR5 198 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 B4GALT6Q9UBX8 382 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 APOBEC3BQ9UH17 382 aaKnown RBP11.25□□□□□ -0.61
RFFL-204ENST00000414419 RAI2Q9Y5P3 530 aa11.25□□□□□ -0.61
RFFL-204ENST00000414419 FAM221BA6H8Z2 402 aa11.24□□□□□ -0.61
RFFL-204ENST00000414419 C3orf70A6NLC5 250 aaPredicted RBP11.24□□□□□ -0.61
RFFL-204ENST00000414419 CACNB4O00305 520 aaPredicted RBP11.24□□□□□ -0.61
RFFL-204ENST00000414419 TRIM38O00635 465 aa11.24□□□□□ -0.61
RFFL-204ENST00000414419 DKK1O94907 266 aa11.24□□□□□ -0.61
RFFL-204ENST00000414419 ZRANB2O95218 330 aaKnown RBP eCLIP11.24□□□□□ -0.616e-6■■■■□ 21
RFFL-204ENST00000414419 JCHAINP01591 159 aa11.24□□□□□ -0.61
RFFL-204ENST00000414419 PROS1P07225 676 aa11.24□□□□□ -0.61
RFFL-204ENST00000414419 CTSEP14091 401 aa11.24□□□□□ -0.61
RFFL-204ENST00000414419 HNF1BP35680 557 aa11.24□□□□□ -0.61
RFFL-204ENST00000414419 DUSP3P51452 185 aaPredicted RBP11.24□□□□□ -0.61
RFFL-204ENST00000414419 DSC2Q02487 901 aa11.24□□□□□ -0.61
RFFL-204ENST00000414419 PPIDQ08752 370 aaKnown RBP11.24□□□□□ -0.61
RFFL-204ENST00000414419 EIF2B5Q13144 721 aaKnown RBP11.24□□□□□ -0.61
RFFL-204ENST00000414419 MTM1Q13496 603 aa11.24□□□□□ -0.61
RFFL-204ENST00000414419 NFATC4Q14934 902 aa11.24□□□□□ -0.61
RFFL-204ENST00000414419 ST3GAL2Q16842 350 aa11.24□□□□□ -0.61
RFFL-204ENST00000414419 PRRT3Q5FWE3 981 aa11.24□□□□□ -0.61
RFFL-204ENST00000414419 TPRG1LQ5T0D9 272 aa11.24□□□□□ -0.61
RFFL-204ENST00000414419 KAZNQ674X7 775 aa11.24□□□□□ -0.61
RFFL-204ENST00000414419 SLC9A4Q6AI14 798 aa11.24□□□□□ -0.61
RFFL-204ENST00000414419 ENPP7Q6UWV6 458 aa11.24□□□□□ -0.61
RFFL-204ENST00000414419 MFSD7Q6UXD7 560 aa11.24□□□□□ -0.61
RFFL-204ENST00000414419 KDM7AQ6ZMT4 941 aa11.24□□□□□ -0.61
RFFL-204ENST00000414419 RD3Q7Z3Z2 195 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms