RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 FSD1LQ9BXM9 530 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 SLC27A5Q9Y2P5 690 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 PRAMEF11O60813 436 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 TADA2AO75478 443 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 PRLP01236 227 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 ALDOCP09972 364 aaKnown RBP15.46■□□□□ 0.07
CPSF7-202ENST00000394888 ZFP36L2P47974 494 aaKnown RBP15.46■□□□□ 0.07
CPSF7-202ENST00000394888 NFKB2Q00653 900 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 EFEMP1Q12805 493 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 CSHL1Q14406 222 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 RFTN1Q14699 578 aaPredicted RBP15.46■□□□□ 0.07
CPSF7-202ENST00000394888 UGP2Q16851 508 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 RNF220Q5VTB9 566 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 GPR150Q8NGU9 434 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 WBP2Q969T9 261 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 BTN2A3PQ96KV6 586 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 PRKD2Q9BZL6 878 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 UXTQ9UBK9 157 aaPredicted RBP15.46■□□□□ 0.07
CPSF7-202ENST00000394888 TLK1Q9UKI8 766 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 ANGPTL2Q9UKU9 493 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 CHD7Q9P2D1 2997 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 HEATR9A2RTY3 570 aa15.46■□□□□ 0.06
CPSF7-202ENST00000394888 TRIM24O15164 1050 aa15.46■□□□□ 0.06
CPSF7-202ENST00000394888 KCNQ1P51787 676 aa15.46■□□□□ 0.06
CPSF7-202ENST00000394888 OR4D1Q15615 310 aa15.46■□□□□ 0.06
CPSF7-202ENST00000394888 UNC50Q53HI1 259 aa15.46■□□□□ 0.06
CPSF7-202ENST00000394888 SH2D4BQ5SQS7 431 aa15.46■□□□□ 0.06
CPSF7-202ENST00000394888 FUNDC1Q8IVP5 155 aa15.46■□□□□ 0.06
CPSF7-202ENST00000394888 DDX50Q9BQ39 737 aaKnown RBP15.46■□□□□ 0.06
CPSF7-202ENST00000394888 NDE1Q9NXR1 346 aa15.46■□□□□ 0.06
CPSF7-202ENST00000394888 VTI1BQ9UEU0 232 aa15.46■□□□□ 0.06
CPSF7-202ENST00000394888 SPO11Q9Y5K1 396 aa15.46■□□□□ 0.06
CPSF7-202ENST00000394888 PRSS51A0A1B0GVH4 220 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 LRRC14BA6NHZ5 514 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 SLC7A4O43246 635 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 LYNP07948 512 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 CD1DP15813 335 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 ATP5F1P24539 256 aaPredicted RBP15.45■□□□□ 0.06
CPSF7-202ENST00000394888 DSG1Q02413 1049 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 CAPRIN2Q6IMN6 1127 aaKnown RBP15.45■□□□□ 0.06
CPSF7-202ENST00000394888 LARP4Q71RC2 724 aaKnown RBP eCLIP15.45■□□□□ 0.06
CPSF7-202ENST00000394888 HDAC10Q969S8 669 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 SPDL1Q96EA4 605 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 SPATA17Q96L03 361 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 PRG3Q9Y2Y8 225 aaPredicted RBP15.45■□□□□ 0.06
CPSF7-202ENST00000394888 MAP3K7O43318 606 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 SKIP12755 728 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 RAG1P15918 1043 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 CR2P20023 1033 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 NUDT2P50583 147 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 GALNT1Q10472 559 aaPredicted RBP15.45■□□□□ 0.06
CPSF7-202ENST00000394888 TAF10Q12962 218 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 CCDC6Q16204 474 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 TSNAXIP1Q2TAA8 658 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 ZNF678Q5SXM1 525 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 SNX31Q8N9S9 440 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 SLCO4A1Q96BD0 722 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 NPAS2Q99743 824 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 TUBB1Q9H4B7 451 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 GMPR2Q9P2T1 348 aaKnown RBP15.45■□□□□ 0.06
CPSF7-202ENST00000394888 ST14Q9Y5Y6 855 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 IPO13O94829 963 aaKnown RBP15.45■□□□□ 0.06
CPSF7-202ENST00000394888 CCDC166P0CW27 439 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 CCNHP51946 323 aaPredicted RBP15.45■□□□□ 0.06
CPSF7-202ENST00000394888 MXRA7P84157 204 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 IL10RBQ08334 325 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 PTPRRQ15256 657 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 GPR158Q5T848 1215 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 GK5Q6ZS86 529 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 FAM110BQ8TC76 370 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 GALPQ9UBC7 116 aa15.45■□□□□ 0.06
CPSF7-202ENST00000394888 SYN3O14994 580 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 ADSLP30566 484 aaPredicted RBP15.44■□□□□ 0.06
CPSF7-202ENST00000394888 RENBPP51606 427 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 CLCN5P51795 746 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 ZNF140P52738 457 aaPredicted RBP15.44■□□□□ 0.06
CPSF7-202ENST00000394888 FOXA1P55317 472 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 SATB1Q01826 763 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 SEPT6Q14141 434 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 TYSND1Q2T9J0 566 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 FSCBQ5H9T9 825 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 PIWIL4Q7Z3Z4 852 aaKnown RBP15.44■□□□□ 0.06
CPSF7-202ENST00000394888 PTAR1Q7Z6K3 402 aaPredicted RBP15.44■□□□□ 0.06
CPSF7-202ENST00000394888 TMEM102Q8N9M5 508 aaPredicted RBP15.44■□□□□ 0.06
CPSF7-202ENST00000394888 OR13C4Q8NGS5 318 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 VWCEQ96DN2 955 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 PRPF19Q9UMS4 504 aaKnown RBP15.44■□□□□ 0.06
CPSF7-202ENST00000394888 PTGDR2Q9Y5Y4 395 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 AIM2O14862 343 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 PBX3P40426 434 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 OR1G1P47890 313 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 ACAP2Q15057 778 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 C6orf10Q5SRN2 563 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 MARC1Q5VT66 337 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 PGAM4Q8N0Y7 254 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 DNAJC1Q96KC8 554 aaKnown RBP15.44■□□□□ 0.06
CPSF7-202ENST00000394888 TBATAQ96M53 351 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 FBXO44Q9H4M3 255 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 CYP4F12Q9HCS2 524 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 CD300AQ9UGN4 299 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms