RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 MAPK4P31152 587 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 CLK3P49761 638 aaKnown RBP5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 CLNS1AP54105 237 aaKnown RBP5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 INHBCP55103 352 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 ZXDAP98168 799 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 KLF10Q13118 480 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 FHL2Q14192 279 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 PGM5Q15124 567 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 TOMM20Q15388 145 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 RPE65Q16518 533 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 MEA1Q16626 185 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 LCE1DQ5T752 114 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 ZNF813Q6ZN06 617 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 ADSSL1Q8N142 457 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 TBC1D16Q8TBP0 767 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 CREB3L4Q8TEY5 395 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 CDCA5Q96FF9 252 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 KLHL15Q96M94 604 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 TIGD1Q96MW7 591 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 FRG2BQ96QU4 278 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 PIP5K1AQ99755 562 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 IFT27Q9BW83 186 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 HEMGNQ9BXL5 484 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 ITPAQ9BY32 194 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 CXorf56Q9H5V9 222 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 DIAPH3Q9NSV4 1193 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 HSPB7Q9UBY9 170 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 IPO11Q9UI26 975 aaKnown RBP5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 ING1Q9UK53 422 aaPredicted RBP5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 SH3TC1Q8TE82 1336 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 LRRC3CA6NJW4 275 aa5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 USP12O75317 370 aa5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 TACC1O75410 805 aa5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 SERPINC1P01008 464 aa5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 ACADMP11310 421 aa5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 LAMP2P13473 410 aa5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 RPS12P25398 132 aaKnown RBP5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 ICAM3P32942 547 aa5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 RPS8P62241 208 aaKnown RBP5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 LRIG3Q6UXM1 1119 aa5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 CTU1Q7Z7A3 348 aaKnown RBP5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 C8orf58Q8NAV2 365 aa5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 DCPSQ96C86 337 aaKnown RBP5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 TEFMQ96QE5 360 aaKnown RBP5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 MOV10Q9HCE1 1003 aaKnown RBP5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 ZNF304Q9HCX3 659 aa5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 ENTPD7Q9NQZ7 604 aa5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 ATP8A2Q9NTI2 1148 aa5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 GPR34Q9UPC5 381 aa5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 CLDN16Q9Y5I7 305 aa5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 DMRT1Q9Y5R6 373 aa5.93□□□□□ -1.46
RNU4-39P-201ENST00000362455 HTTP42858 3142 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 PDE4DIPQ5VU43 2346 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 A0A0A0MQY5 61 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 MLYCDO95822 493 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 IGLV2-14P01704 120 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 GALTP07902 379 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 SPARCP09486 303 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 KLRC2P26717 231 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 FMO4P31512 558 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 BSGP35613 385 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 ARL3P36405 182 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 ACVRL1P37023 503 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 TMPOP42166 694 aaKnown RBP5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 GDF5P43026 501 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 SLC12A2P55011 1212 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 EIF3BP55884 814 aaKnown RBP5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 RIPK4P57078 832 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 COL10A1Q03692 680 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 DPTQ07507 201 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 MAMLD1Q13495 774 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 ZNF268Q14587 947 aaPredicted RBP5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 KCTD2Q14681 263 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 HSP90AB3PQ58FF7 597 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 TMEM268Q5VZI3 342 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 IL20RBQ6UXL0 311 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 MOB3CQ70IA8 216 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 CYB5R4Q7L1T6 521 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 PRSS45Q7RTY3 260 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 TADA2BQ86TJ2 420 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 FAM160B2Q86V87 743 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 CCDC25Q86WR0 208 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 FAM98AQ8NCA5 519 aaKnown RBP5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 C11orf65Q8NCR3 313 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 FAR1Q8WVX9 515 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 PERPQ96FX8 193 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 MXD3Q9BW11 206 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 GHITMQ9H3K2 345 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 HIPK3Q9H422 1215 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 SNTG1Q9NSN8 517 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 C20orf141Q9NUB4 165 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 GRHL1Q9NZI5 618 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 KIAA1456Q9P272 454 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 FBXO40Q9UH90 709 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 RABGAP1Q9Y3P9 1069 aa5.92□□□□□ -1.46
RNU4-39P-201ENST00000362455 C2CD4BA6NLJ0 364 aa5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 PROP1O75360 226 aa5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 NEURL1O76050 574 aa5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 IL1AP01583 271 aa5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 HSP90AA1P07900 732 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms