RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 SPAG4Q9NPE6 437 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 RSL24D1Q9UHA3 163 aaKnown RBP16.45■□□□□ 0.22
PTCH1-201ENST00000331920 FAM86C2PA6NEL3 165 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 SOX10P56693 466 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 PPP1R15BQ5SWA1 713 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 LINGO2Q7L985 606 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 CDYL2Q8N8U2 506 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 SUN5Q8TC36 379 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 THRSPQ92748 146 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 MYOZ2Q9NPC6 264 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 RFXANKO14593 260 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 NAMPTP43490 491 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 SPIN3Q5JUX0 258 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 AADACL4Q5VUY2 407 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 SMARCD3Q6STE5 483 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 FBXO25Q8TCJ0 367 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 B3GNT4Q9C0J1 378 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 GNEQ9Y223 722 aaKnown RBP16.45■□□□□ 0.22
PTCH1-201ENST00000331920 A0A087X0B3 334 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 ITGB1P05556 798 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 NR2C2P49116 596 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 EPHA10Q5JZY3 1008 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 GTF2IRD2BQ6EKJ0 949 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 GTF2IRD2Q86UP8 949 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 NEDD1Q8NHV4 660 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 TMEM68Q96MH6 324 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 OR52E6Q96RD3 313 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 GTF3C4Q9UKN8 822 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 NARSO43776 548 aaKnown RBP16.45■□□□□ 0.22
PTCH1-201ENST00000331920 SLC25A3Q00325 362 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 FAAP100Q0VG06 881 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 SSX6Q7RTT6 188 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 ZNF227Q86WZ6 799 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 AKAP1Q92667 903 aaKnown RBP eCLIP16.45■□□□□ 0.22
PTCH1-201ENST00000331920 RIOK2Q9BVS4 552 aaKnown RBP16.45■□□□□ 0.22
PTCH1-201ENST00000331920 ATP4AP20648 1035 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 CES5AQ6NT32 575 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 TMPRSS11AQ6ZMR5 421 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 ZNF70Q9UC06 446 aaPredicted RBP16.45■□□□□ 0.22
PTCH1-201ENST00000331920 CDH5P33151 784 aaPredicted RBP16.44■□□□□ 0.22
PTCH1-201ENST00000331920 SDC2P34741 201 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 ENPEPQ07075 957 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 ACTL9Q8TC94 416 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 LENG1Q96BZ8 264 aaPredicted RBP16.44■□□□□ 0.22
PTCH1-201ENST00000331920 ATG4CQ96DT6 458 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 XPNPEP3Q9NQH7 507 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 NARFQ9UHQ1 456 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 GAKO14976 1311 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 PRKAA2P54646 552 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 NRG1Q02297 640 aaPredicted RBP16.44■□□□□ 0.22
PTCH1-201ENST00000331920 SF1Q15637 639 aaKnown RBP16.44■□□□□ 0.22
PTCH1-201ENST00000331920 PLET1Q6UQ28 207 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 C15orf38-AP3S2A0A0A6YYH1 394 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 LRIG2O94898 1065 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 NR2F6P10588 404 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 CCDC80Q76M96 950 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 ARPINQ7Z6K5 226 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 DIRAS2Q96HU8 199 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 RGS17Q9UGC6 210 aaPredicted RBP16.44■□□□□ 0.22
PTCH1-201ENST00000331920 CTSKP43235 329 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 ALDH5A1P51649 535 aaPredicted RBP16.44■□□□□ 0.22
PTCH1-201ENST00000331920 STK40Q8N2I9 435 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 DMRTB1Q96MA1 342 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 ANKEF1Q9NU02 776 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 SETD4Q9NVD3 440 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 CATP04040 527 aaKnown RBP16.44■□□□□ 0.22
PTCH1-201ENST00000331920 RGS8P57771 180 aaPredicted RBP16.44■□□□□ 0.22
PTCH1-201ENST00000331920 RIN1Q13671 783 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 SNAPC1Q16533 368 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 CRTC3Q6UUV7 619 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 DENND1CQ8IV53 801 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 CHST13Q8NET6 341 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 MCFD2Q8NI22 146 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 MRPL9Q9BYD2 267 aaKnown RBP16.44■□□□□ 0.22
PTCH1-201ENST00000331920 LOC100509620A0A075B734 347 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 EPHB6O15197 1021 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 SEPT4O43236 478 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 ZNF16P17020 682 aaPredicted RBP16.44■□□□□ 0.22
PTCH1-201ENST00000331920 CD40LGP29965 261 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 RPL14P50914 215 aaKnown RBP16.44■□□□□ 0.22
PTCH1-201ENST00000331920 FSTL1Q12841 308 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 E2F2Q14209 437 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 ZYG11AQ6WRX3 759 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 TMC3Q7Z5M5 1100 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 AMIGO2Q86SJ2 522 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 SEMA4AQ9H3S1 761 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 BMT2Q1RMZ1 405 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 ANKRD26P1Q6NSI1 321 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 GPR65Q8IYL9 337 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 FBXW8Q8N3Y1 598 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 INO80EQ8NBZ0 244 aaPredicted RBP16.44■□□□□ 0.22
PTCH1-201ENST00000331920 SLC22A8Q8TCC7 542 aa16.44■□□□□ 0.22
PTCH1-201ENST00000331920 GTF3C2Q8WUA4 911 aaPredicted RBP16.44■□□□□ 0.22
PTCH1-201ENST00000331920 POLR1EQ9GZS1 481 aaKnown RBP16.44■□□□□ 0.22
PTCH1-201ENST00000331920 MTF2Q9Y483 593 aaPredicted RBP16.44■□□□□ 0.22
PTCH1-201ENST00000331920 BTBD19C9JJ37 291 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 GCATO75600 419 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 PSMG1O95456 288 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 CTPS1P17812 591 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 CDK16Q00536 496 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms