RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 SOWAHCQ53LP3 525 aaPredicted RBP4.58□□□□□ -1.68
CCDC54-201ENST00000261058 FAM205BPQ63HN1 556 aa4.58□□□□□ -1.68
CCDC54-201ENST00000261058 PIM3Q86V86 326 aa4.58□□□□□ -1.68
CCDC54-201ENST00000261058 MB21D2Q8IYB1 491 aaPredicted RBP4.58□□□□□ -1.68
CCDC54-201ENST00000261058 CNPY4Q8N129 248 aa4.58□□□□□ -1.68
CCDC54-201ENST00000261058 NEXN-AS1Q8NBZ9 246 aa4.58□□□□□ -1.68
CCDC54-201ENST00000261058 FAM110AQ9BQ89 295 aa4.58□□□□□ -1.68
CCDC54-201ENST00000261058 SLC29A3Q9BZD2 475 aa4.58□□□□□ -1.68
CCDC54-201ENST00000261058 EHD2Q9NZN4 543 aa4.58□□□□□ -1.68
CCDC54-201ENST00000261058 IL36RNQ9UBH0 155 aa4.58□□□□□ -1.68
CCDC54-201ENST00000261058 LYVE1Q9Y5Y7 322 aa4.58□□□□□ -1.68
CCDC54-201ENST00000261058 ZNF521Q96K83 1311 aa4.58□□□□□ -1.68
CCDC54-201ENST00000261058 KAT6BQ8WYB5 2073 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 FSD2A1L4K1 749 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 ANKRD18BA2A2Z9 1011 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 FAM90A8PA6NJQ4 464 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 A8MZ25 164 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 BCAT2O15382 392 aaPredicted RBP4.57□□□□□ -1.68
CCDC54-201ENST00000261058 RGS11O94810 467 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 NDUFB4O95168 129 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 SYF2O95926 243 aaKnown RBP4.57□□□□□ -1.68
CCDC54-201ENST00000261058 FAM90A13PP0C7W8 464 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 FAM90A24PP0C7X0 464 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 TFPIP10646 304 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 CDK4P11802 303 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 GPTP24298 496 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 HOXD13P35453 343 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 COPB2P35606 906 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 DRG2P55039 364 aaKnown RBP4.57□□□□□ -1.68
CCDC54-201ENST00000261058 ARF3P61204 181 aaPredicted RBP4.57□□□□□ -1.68
CCDC54-201ENST00000261058 ARF1P84077 181 aaKnown RBP4.57□□□□□ -1.68
CCDC54-201ENST00000261058 CEBPZQ03701 1054 aaKnown RBP4.57□□□□□ -1.68
CCDC54-201ENST00000261058 NIPAL4Q0D2K0 466 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 KRT24Q2M2I5 525 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 C6orf141Q5SZD1 244 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 CES5AQ6NT32 575 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 TTI2Q6NXR4 508 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 ANKRD54Q6NXT1 300 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 CFAP161Q6P656 301 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 FBXO46Q6PJ61 603 aaPredicted RBP4.57□□□□□ -1.68
CCDC54-201ENST00000261058 LCTLQ6UWM7 567 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 CCDC129Q6ZRS4 1044 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 MTSS1LQ765P7 747 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 MON1BQ7L1V2 547 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 FASTKD5Q7L8L6 764 aaKnown RBP4.57□□□□□ -1.68
CCDC54-201ENST00000261058 PELI3Q8N2H9 469 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 FRMD1Q8N878 549 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 HUS1BQ8NHY5 278 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 SMARCE1Q969G3 411 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 PPP1R13BQ96KQ4 1090 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 WDFY2Q96P53 400 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 BARD1Q99728 777 aaKnown RBP4.57□□□□□ -1.68
CCDC54-201ENST00000261058 C1QTNF5Q9BXJ0 243 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 ESRP2Q9H6T0 727 aaKnown RBP4.57□□□□□ -1.68
CCDC54-201ENST00000261058 POLR1BQ9H9Y6 1135 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 MKKSQ9NPJ1 570 aaPredicted RBP4.57□□□□□ -1.68
CCDC54-201ENST00000261058 AAR2Q9Y312 384 aaKnown RBP4.57□□□□□ -1.68
CCDC54-201ENST00000261058 STON1Q9Y6Q2 735 aa4.57□□□□□ -1.68
CCDC54-201ENST00000261058 FAM237AA0A1B0GTK4 181 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 FAM237BA0A1B0GVD1 139 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 RPS10-NUDT3A0A1W2PQS6 291 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 CLEC18AA5D8T8 446 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 AGAP14A8MT82 685 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 B4DGG1 531 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 VWA5AO00534 786 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 TNFRSF13BO14836 293 aaPredicted RBP4.56□□□□□ -1.68
CCDC54-201ENST00000261058 ZNF500O60304 480 aaPredicted RBP4.56□□□□□ -1.68
CCDC54-201ENST00000261058 OR2C1O95371 312 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 CYP1A2P05177 515 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 CBSLP0DN79 551 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 CBSP35520 551 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 UBA7P41226 1012 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 PMS2P54278 862 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 ABATP80404 500 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 POU5F1Q01860 360 aaKnown RBP4.56□□□□□ -1.68
CCDC54-201ENST00000261058 ROR2Q01974 943 aaKnown RBP4.56□□□□□ -1.68
CCDC54-201ENST00000261058 PPATQ06203 517 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 Q0VFX4 171 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 GPS2Q13227 327 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 CTTNQ14247 550 aaKnown RBP4.56□□□□□ -1.68
CCDC54-201ENST00000261058 ARHGEF6Q15052 776 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 MED22Q15528 200 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 COL28A1Q2UY09 1125 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 USP41Q3LFD5 358 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 DNTTIP2Q5QJE6 756 aaKnown RBP4.56□□□□□ -1.68
CCDC54-201ENST00000261058 OTUD1Q5VV17 481 aaPredicted RBP4.56□□□□□ -1.68
CCDC54-201ENST00000261058 HIST2H2BCQ6DN03 193 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 HIST2H2BDQ6DRA6 164 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 TSSK4Q6SA08 328 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 KLHL24Q6TFL4 600 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 WDR63Q8IWG1 891 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 ZCCHC9Q8N567 271 aaKnown RBP4.56□□□□□ -1.68
CCDC54-201ENST00000261058 AADATQ8N5Z0 425 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 ZBTB2Q8N680 514 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 CLEC18CQ8NCF0 446 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 ARRDC2Q8TBH0 407 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 CAMK1GQ96NX5 476 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 FAM234AQ9H0X4 552 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 GHITMQ9H3K2 345 aa4.56□□□□□ -1.68
CCDC54-201ENST00000261058 PDZD7Q9H5P4 517 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms